Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O14
(594 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132674-1|AAI32675.1| 1454|Homo sapiens mediator complex subuni... 30 5.4
BC132672-1|AAI32673.1| 1454|Homo sapiens mediator complex subuni... 30 5.4
BC098377-1|AAH98377.1| 1454|Homo sapiens mediator complex subuni... 30 5.4
AF304448-1|AAG22547.1| 1454|Homo sapiens vitamin D receptor-inte... 30 5.4
AF135802-1|AAD24360.1| 1454|Homo sapiens thyroid hormone recepto... 30 5.4
AF104256-1|AAD12725.1| 1454|Homo sapiens transcriptional co-acti... 30 5.4
AB006651-1|BAA28626.1| 1454|Homo sapiens EXLM1 protein. 30 5.4
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 29 9.4
>BC132674-1|AAI32675.1| 1454|Homo sapiens mediator complex subunit
14 protein.
Length = 1454
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 492 LALCGSHRKFLRQRRTIASIEWPMLIVQIRRNGFPFLD*LLVTSPALKSVQ*PLQKLMSR 313
+A+C ++ F+ R ++++E P VQ+ +GF LL P K + QK + R
Sbjct: 645 VAMCDTNMPFVGLRLELSNLEIPHQGVQVEGDGFSHAIRLLKIPPC-KGITEETQKALDR 703
Query: 312 -IIRCTSR 292
++ CT R
Sbjct: 704 SLLDCTFR 711
>BC132672-1|AAI32673.1| 1454|Homo sapiens mediator complex subunit
14 protein.
Length = 1454
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 492 LALCGSHRKFLRQRRTIASIEWPMLIVQIRRNGFPFLD*LLVTSPALKSVQ*PLQKLMSR 313
+A+C ++ F+ R ++++E P VQ+ +GF LL P K + QK + R
Sbjct: 645 VAMCDTNMPFVGLRLELSNLEIPHQGVQVEGDGFSHAIRLLKIPPC-KGITEETQKALDR 703
Query: 312 -IIRCTSR 292
++ CT R
Sbjct: 704 SLLDCTFR 711
>BC098377-1|AAH98377.1| 1454|Homo sapiens mediator complex subunit
14 protein.
Length = 1454
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 492 LALCGSHRKFLRQRRTIASIEWPMLIVQIRRNGFPFLD*LLVTSPALKSVQ*PLQKLMSR 313
+A+C ++ F+ R ++++E P VQ+ +GF LL P K + QK + R
Sbjct: 645 VAMCDTNMPFVGLRLELSNLEIPHQGVQVEGDGFSHAIRLLKIPPC-KGITEETQKALDR 703
Query: 312 -IIRCTSR 292
++ CT R
Sbjct: 704 SLLDCTFR 711
>AF304448-1|AAG22547.1| 1454|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP150
protein.
Length = 1454
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 492 LALCGSHRKFLRQRRTIASIEWPMLIVQIRRNGFPFLD*LLVTSPALKSVQ*PLQKLMSR 313
+A+C ++ F+ R ++++E P VQ+ +GF LL P K + QK + R
Sbjct: 645 VAMCDTNMPFVGLRLELSNLEIPHQGVQVEGDGFSHAIRLLKIPPC-KGITEETQKALDR 703
Query: 312 -IIRCTSR 292
++ CT R
Sbjct: 704 SLLDCTFR 711
>AF135802-1|AAD24360.1| 1454|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP170
protein.
Length = 1454
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 492 LALCGSHRKFLRQRRTIASIEWPMLIVQIRRNGFPFLD*LLVTSPALKSVQ*PLQKLMSR 313
+A+C ++ F+ R ++++E P VQ+ +GF LL P K + QK + R
Sbjct: 645 VAMCDTNMPFVGLRLELSNLEIPHQGVQVEGDGFSHAIRLLKIPPC-KGITEETQKALDR 703
Query: 312 -IIRCTSR 292
++ CT R
Sbjct: 704 SLLDCTFR 711
>AF104256-1|AAD12725.1| 1454|Homo sapiens transcriptional
co-activator CRSP150 protein.
Length = 1454
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 492 LALCGSHRKFLRQRRTIASIEWPMLIVQIRRNGFPFLD*LLVTSPALKSVQ*PLQKLMSR 313
+A+C ++ F+ R ++++E P VQ+ +GF LL P K + QK + R
Sbjct: 645 VAMCDTNMPFVGLRLELSNLEIPHQGVQVEGDGFSHAIRLLKIPPC-KGITEETQKALDR 703
Query: 312 -IIRCTSR 292
++ CT R
Sbjct: 704 SLLDCTFR 711
>AB006651-1|BAA28626.1| 1454|Homo sapiens EXLM1 protein.
Length = 1454
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 492 LALCGSHRKFLRQRRTIASIEWPMLIVQIRRNGFPFLD*LLVTSPALKSVQ*PLQKLMSR 313
+A+C ++ F+ R ++++E P VQ+ +GF LL P K + QK + R
Sbjct: 645 VAMCDTNMPFVGLRLELSNLEIPHQGVQVEGDGFSHAIRLLKIPPC-KGITEETQKALDR 703
Query: 312 -IIRCTSR 292
++ CT R
Sbjct: 704 SLLDCTFR 711
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 101 YQRISIKPDRSRAKTEPSTHVITSPLDDVSKTQSFRTGD 217
Y ++ P R RA+T P + + TSP D+V + QS + D
Sbjct: 2688 YPTTTVLPTR-RAQTPPISSLPTSPSDEVGRRQSLTSPD 2725
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,250,155
Number of Sequences: 237096
Number of extensions: 1576907
Number of successful extensions: 2705
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2705
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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