Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O14
         (594 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    23   1.7  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    23   1.7  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    23   2.3  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   5.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.9  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   9.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   9.1  

>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 112 NALVHLYISDITKENTGFNYNK 47
           ++L + YIS+I+  N   NYNK
Sbjct: 83  SSLSNNYISNISNYNNNNNYNK 104


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 112 NALVHLYISDITKENTGFNYNK 47
           ++L + YIS+I+  N   NYNK
Sbjct: 321 SSLSNNYISNISNYNNNNNYNK 342


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 112 NALVHLYISDITKENTGFNYNK 47
           ++L + YIS+I+  N   NYNK
Sbjct: 83  SSLSNNYISNISNYNNDNNYNK 104


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 286 MHTGSAPYYTAH 321
           +HTG  PY+ +H
Sbjct: 31  LHTGEKPYHCSH 42


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 117 LNRTAAVPKPSPRHMLSP 170
           LN +   P PSPR ++ P
Sbjct: 875 LNLSKKSPSPSPRPLVGP 892


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +1

Query: 382 KKRKAISSYLDYQHGPFYRRYRS 450
           KK      YLDY   PF    RS
Sbjct: 217 KKDTTFDDYLDYAINPFDYEKRS 239


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +1

Query: 382 KKRKAISSYLDYQHGPFYRRYRS 450
           KK      YLDY   PF    RS
Sbjct: 217 KKDTTFDDYLDYAINPFDYEKRS 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,968
Number of Sequences: 438
Number of extensions: 3288
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)