Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O10
         (638 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      93   2e-19
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      81   1e-15
SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                      75   5e-14
SB_797| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   7.4  
SB_48639| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  
SB_37009| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
 Frame = -3

Query: 636 DFAYGEALSLMLKLIELPYVGEESSLLLVLPN*IDGLHALEEKLKKD-LSVLERAQRNMY 460
           +F Y E+ +L  +++ELPY GE+ S++++LPN +DGL  LE  L K+ L     + RN +
Sbjct: 204 EFRYLESSTLGCQIVELPYAGEKLSMVVLLPNEVDGLGKLESSLNKETLQEAMTSLRNSH 263

Query: 459 TNEVDVYLPKFKCETTTNLKEVLQAMNVKKLFEPGQARLDNLLKNGGDLYVSEAVQKAFI 280
             EV+V LPKF      +L E L+ M    LF PG+A L  +  +   L VSE V KAF+
Sbjct: 264 PEEVEVTLPKFTLTQEFSLGETLKGMGASDLFSPGKADLSGI--SAAPLVVSEVVHKAFV 321

Query: 279 XXXXXXXXXXXXXVFYFTRSSRVVNTIPFIVDRPFYYTLKY 157
                               S  +N + F  + PF + +++
Sbjct: 322 EVNEEGTIAAAATGVGIMLMSMPMNPV-FYANHPFLFLIRH 361


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 42/149 (28%), Positives = 80/149 (53%)
 Frame = -3

Query: 600 KLIELPYVGEESSLLLVLPN*IDGLHALEEKLKKDLSVLERAQRNMYTNEVDVYLPKFKC 421
           +++ELPY G++++++++LP    G+ +LE+ +  D+ ++E+ +R M    V+V +PKF+ 
Sbjct: 186 RVVELPYSGDDTAMVIILPEEPSGIFSLEKSI--DVEIMEKWRRLMINTTVEVSIPKFRL 243

Query: 420 ETTTNLKEVLQAMNVKKLFEPGQARLDNLLKNGGDLYVSEAVQKAFIXXXXXXXXXXXXX 241
                L+ +LQ + V  +F+  +A L  +    G LYVS A+ KA I             
Sbjct: 244 SQKLELRSLLQDLGVSDIFDSRKADLSGISAAKG-LYVSSAIHKAHIEVNERGTVAAATT 302

Query: 240 VFYFTRSSRVVNTIPFIVDRPFYYTLKYK 154
                + S  +N + F  D PF +++ +K
Sbjct: 303 GVVMAKRSLDMNEV-FYADHPFLFSIHHK 330


>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
 Frame = -3

Query: 633 FAYGEALSLMLKLIELPYVGEESSLLLVLPN*IDGLHALEEKLKKD-LSVLERAQRNMYT 457
           F Y  +     KL+ELPYV  + S++LVLP+  +GL   E+ L  D ++ +  +  +   
Sbjct: 168 FKYLHSDKYKCKLLELPYVDTQLSMVLVLPDETEGLARFEQDLTHDKMTDIFNSVSSQRP 227

Query: 456 NEVDVYLPKFKCETTTNLKEVLQAMNVKKLFEPGQARLDNLLKNGGDLYVSEAVQKAFI- 280
            +V+VY+PKFK  +   L E LQ + +KK+F+   A    +      L+VS  + KAF+ 
Sbjct: 228 ADVEVYIPKFKMTSEFKLNEALQELGMKKMFDQAAADFTGISLPPEHLFVSAVLHKAFVE 287

Query: 279 XXXXXXXXXXXXXVFYFTRSSRVVNTIPFIVDRPFYYTLKY 157
                             R + +   + F  D PF + +++
Sbjct: 288 VNEEGTEAAAATAAIMMMRCAIMREPLVFRADHPFLFLIQH 328


>SB_797| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 291

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
 Frame = -3

Query: 510 KLKKDLSVLERAQRNMYTNEVDVYLPKFKCE----TTTNLKEVLQAMNVKKLFEPGQARL 343
           KL++D S  +   +  +++  D   PK K      T  N K+V  +  VKKL E    RL
Sbjct: 73  KLQQDASQYQHHVKGNFSD--DELFPKGKSYEKMLTDNNTKQVFLSSLVKKLHEKAVTRL 130

Query: 342 DN 337
           DN
Sbjct: 131 DN 132


>SB_48639| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 143

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
 Frame = -2

Query: 232 FHTFVKG--SQHYTFHR--RPTFLLYAEVQTKFLI*RSIRFLDIPISRKYEYYNLENQLK 65
           F T VK    +HY          L+Y ++  ++ + +  +++D  + R+ + +N+E  +K
Sbjct: 6   FQTIVKNFMEEHYQHFEDTEENKLIYTDIFKEY-VNKIEKYIDEQLHRRMQSFNMEEFMK 64

Query: 64  NLYQR 50
           NL +R
Sbjct: 65  NLQRR 69


>SB_37009| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 535

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = -3

Query: 516 EEKLKKDLSVLERAQRNMYTNEVDVYLPKFKCETTTNLKE--VLQAMNVKKLFE 361
           E+ + KDL  L +   N  +  V V +P   CE T N  E  V +A   +KL E
Sbjct: 410 EDTISKDLKYLHKLALNAGSMTVAVTIPGRLCELTPNCSEHKVARAQINEKLRE 463


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,965,118
Number of Sequences: 59808
Number of extensions: 238915
Number of successful extensions: 538
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)