Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O10
         (638 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g25240.1 68415.m03020 serpin, putative / serine protease inhi...    55   5e-08
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi...    45   4e-05
At5g50140.1 68418.m06210 ankyrin repeat family protein contains ...    28   4.5  
At4g09310.1 68417.m01539 SPla/RYanodine receptor (SPRY) domain-c...    27   7.9  
At4g09250.1 68417.m01532 SPla/RYanodine receptor (SPRY) domain-c...    27   7.9  
At4g09200.1 68417.m01522 SPla/RYanodine receptor (SPRY) domain-c...    27   7.9  

>At2g25240.1 68415.m03020 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 324

 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
 Frame = -3

Query: 600 KLIELPYVGEES--SLLLVLPN*IDGLHALEEKLKKDLSVLERAQRNMYTNEVDVY-LPK 430
           K++ LPY+ ++   S+ + LPN  +GL  L EK+  + S  +     ++   V  + +PK
Sbjct: 156 KVLRLPYIEDQRQFSMYIYLPNDKEGLAPLLEKIGSEPSFFDN-HIPLHCISVGAFRIPK 214

Query: 429 FKCETTTNLKEVLQAMNVKKLFE--PGQARLDNLLKNGGDLYVSEAVQKAFIXXXXXXXX 256
           FK     N  EVL+ M +   F    G   + +   NG DLYVS  + KA I        
Sbjct: 215 FKFSFEFNASEVLKDMGLTSPFNNGGGLTEMVDSPSNGDDLYVSSILHKACIEVDEEGTE 274

Query: 255 XXXXXVFYFTRSSRVVNTIPFIVDRPFYYTLK 160
                V   + +S   N   F+ DRPF +T++
Sbjct: 275 AAAVSVGVVSCTSFRRNP-DFVADRPFLFTVR 305


>At2g26390.1 68415.m03167 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 389

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
 Frame = -3

Query: 600 KLIELPYVGEES--SLLLVLPN*IDGLHALEEKLKKDLSVLERAQRNMYTNEVD-VYLPK 430
           +++ LPYV ++   S+ + LPN  DGL AL EK+  +   L+ +   ++   VD + +PK
Sbjct: 221 QVLRLPYVEDKRHFSMYIYLPNDKDGLAALLEKISTEPGFLD-SHIPLHRTPVDALRIPK 279

Query: 429 FKCETTTNLKEVLQAMNVKKLFEPGQARLDNLL---KNGGDLYVSEAVQKAFIXXXXXXX 259
                     EVL+ M +   F   +  L  ++    NG  L+VS  + KA I       
Sbjct: 280 LNFSFEFKASEVLKDMGLTSPF-TSKGNLTEMVDSPSNGDKLHVSSIIHKACIEVDEEGT 338

Query: 258 XXXXXXVFYFTRSSRVVNTIPFIVDRPFYYTLK 160
                 V        + N   F+ D PF +T++
Sbjct: 339 EAAAVSVAIMMPQCLMRNP-DFVADHPFLFTVR 370


>At5g50140.1 68418.m06210 ankyrin repeat family protein contains
           ankyrin repeat domains, Pfam:PF00023
          Length = 535

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -3

Query: 579 VGEESSLLLVLPN*IDGLHALEEKLKKDLSVLERAQRNMYT 457
           +G  S LLL+L +  + + +LEE +  DL + E   ++ +T
Sbjct: 71  LGHTSILLLMLESTAESIESLEETVPNDLKLAEMVNKDGFT 111


>At4g09310.1 68417.m01539 SPla/RYanodine receptor (SPRY)
           domain-containing protein low similarity to RanBPM [Homo
           sapiens] GI:15080674; contains Pfam profile PF00622:
           SPRY domain
          Length = 397

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 237 FYFTRSSRVVNTIPFIVDRPFYYTL 163
           F+FT++  +V TIP    RP Y T+
Sbjct: 137 FFFTKNGTIVGTIPRQFRRPVYPTI 161


>At4g09250.1 68417.m01532 SPla/RYanodine receptor (SPRY)
           domain-containing protein low similarity to RanBPM [Homo
           sapiens] GI:15080674; contains Pfam profile PF00622:
           SPRY domain
          Length = 427

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 237 FYFTRSSRVVNTIPFIVDRPFYYTL 163
           F+FT++  +V TIP    RP Y T+
Sbjct: 215 FFFTKNGTIVGTIPRQFRRPVYPTI 239


>At4g09200.1 68417.m01522 SPla/RYanodine receptor (SPRY)
           domain-containing protein low similarity to RanBPM [Homo
           sapiens] GI:15080674; contains Pfam profile PF00622:
           SPRY domain
          Length = 397

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 237 FYFTRSSRVVNTIPFIVDRPFYYTL 163
           F+FT++  +V TIP    RP Y T+
Sbjct: 137 FFFTKNGTIVGTIPRQFRRPVYPTI 161


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,651,702
Number of Sequences: 28952
Number of extensions: 177793
Number of successful extensions: 399
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)