Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O08
         (485 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr...    30   0.16 
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc...    27   2.0  
SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces pom...    27   2.0  
SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|c...    27   2.0  
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo...    25   4.6  
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa...    25   6.1  
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar...    25   6.1  
SPCC4B3.16 |tip41||TIP41-like type 2a phosphatase regulator Tip4...    25   8.0  
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo...    25   8.0  
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc...    25   8.0  
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    25   8.0  

>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 877

 Score = 30.3 bits (65), Expect = 0.16
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = +3

Query: 408 LRLVTHTTSRFVKH-DSTTSLSVLPS 482
           +R+V HT S+  KH DS+ SLS LP+
Sbjct: 56  VRVVRHTASKLTKHGDSSQSLSTLPN 81


>SPCC622.12c |||NADP-specific glutamate dehydrogenase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 451

 Score = 26.6 bits (56), Expect = 2.0
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 209 DPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 358
           +P F Q Y  IVG I + K + + +P+ K     + I + V+E  VT+ D
Sbjct: 6   EPEFQQAYKEIVGSIESSKLF-EVHPELKRVLPIISIPERVLEFRVTWED 54


>SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 396

 Score = 26.6 bits (56), Expect = 2.0
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 283 IRLQVMLECVNVTH-NPVI*LIECRVSKCGLVKVKRTGHEGVLVEWF 146
           I  Q  L+ +  TH NPV    EC +S+C L   K  G E  L + F
Sbjct: 233 ILFQNALDALPTTHGNPV----ECDISRCPLNACKIAGQETELADLF 275


>SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 300

 Score = 26.6 bits (56), Expect = 2.0
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +3

Query: 12  STMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSL---AMCSVQHLNHSTSTPSCPVR 182
           +T+ R+  L +T  +   +C K+  + I  DL+  SL   A   +Q +   TS+ S PV 
Sbjct: 219 ATLLRRHLLDKTAKRYHDLCEKRPYKYITTDLLSPSLTCFASDILQTVPEYTSSQSSPVL 278

Query: 183 LTFT 194
           L  T
Sbjct: 279 LPAT 282


>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
           Sir2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 475

 Score = 25.4 bits (53), Expect = 4.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 107 YEIVARHVLGAAPKPFDKHTFMPSALDFYQTALRD 211
           Y  +ARH L    + FD HTF  +   FY T  RD
Sbjct: 183 YARLARHGLSEPSEMFDIHTFRENPEIFY-TFARD 216


>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1072

 Score = 25.0 bits (52), Expect = 6.1
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 216  HSISYITGLWVTLTHSSIT*SLILKRNFISSALKSMMLSLRN*SH 350
            +S S I   W T  HSS+  +L   R +  S +  ++  LRN  H
Sbjct: 973  NSKSVIGENWTTCLHSSLVDNLGKYRKYDGSKILDILRVLRNKRH 1017


>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 902

 Score = 25.0 bits (52), Expect = 6.1
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +3

Query: 141 HLNHSTSTPSCPVRLTF--TKPHFETLHSISYITGLWVTLT 257
           HL  S STPS    LTF  T  +  T H       LW  L+
Sbjct: 605 HLIDSISTPSVCTSLTFAPTGDYLATTHVDQVGISLWTNLS 645


>SPCC4B3.16 |tip41||TIP41-like type 2a phosphatase regulator
           Tip41|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 252

 Score = 24.6 bits (51), Expect = 8.0
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 20  EKAINFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLG 136
           +K +N   N W     L+E+E+  + +  +++ AR V G
Sbjct: 131 QKILNAGQNLWFNEIILFEDELADNGKSMFDVRARVVQG 169


>SPBC31F10.10c |||zf-MYND type zinc finger
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 574

 Score = 24.6 bits (51), Expect = 8.0
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +2

Query: 128 VLGAAPKPFDKHTFMPSALDFYQTALRDPAFYQLYNR 238
           V G  P PF   T   S+   Y   LRD    QL N+
Sbjct: 180 VNGDVPSPFGASTASSSSRRVYSVDLRDSGDVQLPNQ 216


>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 581

 Score = 24.6 bits (51), Expect = 8.0
 Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +2

Query: 227 LYNRIVGYINAFKHYLKP----YPQEKLHFVGVKINDVVVEKL 343
           +Y +++G +N F+  ++     Y   +   + VKI+ +VV+KL
Sbjct: 385 VYYKLIGILNRFRKSVQRQEENYVNTRSTILSVKIHHIVVQKL 427


>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 390

 Score = 24.6 bits (51), Expect = 8.0
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 27  QLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTP-SCPVRL 185
           +L  S TI    P+C++ K +  +N    L+L+   +  L   TS P  CP++L
Sbjct: 228 ELNASVTISG-IPVCIRSKEKMFLNPDCALTLSFICI-FLAQYTSIPLPCPLQL 279


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,986,157
Number of Sequences: 5004
Number of extensions: 40149
Number of successful extensions: 115
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 188065158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)