Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O07
         (504 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7HL81 Cluster: Alpha-mannosidase; n=2; Thermotogaceae|...    33   3.7  
UniRef50_Q4UC44 Cluster: DNA repair (RAD6) endonuclease, putativ...    32   6.4  

>UniRef50_A7HL81 Cluster: Alpha-mannosidase; n=2;
           Thermotogaceae|Rep: Alpha-mannosidase - Fervidobacterium
           nodosum Rt17-B1
          Length = 1020

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 20/61 (32%), Positives = 33/61 (54%)
 Frame = +2

Query: 137 WGCQQYNVFTYYRIVYY*LKLKKIINRTFVTNATKIVVSVYEQTDANMDVNRLERTLSPV 316
           +G ++ +VF Y RIV Y  +++K+I   FV N    +     ++ AN  VN  +  LS +
Sbjct: 123 FGTREESVFKYSRIVVYDNEIRKVI--FFVKNVIDTIKETNNESLANALVNLADEFLSKL 180

Query: 317 N 319
           N
Sbjct: 181 N 181


>UniRef50_Q4UC44 Cluster: DNA repair (RAD6) endonuclease, putative;
           n=2; Theileria|Rep: DNA repair (RAD6) endonuclease,
           putative - Theileria annulata
          Length = 1422

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +2

Query: 182 YY*LKLKKIINRTFVTNATKIVVSVYEQTDANMDVNRLERTLSPVNDC*N 331
           YY    KKI+N++ V N  KI++   EQ++ N D+ +L+      ND  N
Sbjct: 719 YYSNINKKILNKSNVYNLYKILLRQLEQSNLNPDILKLDNNNDENNDTNN 768


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,109,883
Number of Sequences: 1657284
Number of extensions: 7359736
Number of successful extensions: 14137
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14125
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)