Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O07
         (504 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3825| Best HMM Match : Pheromone (HMM E-Value=3.3)                  29   2.9  
SB_10759| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.8  

>SB_3825| Best HMM Match : Pheromone (HMM E-Value=3.3)
          Length = 189

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 327 KMSPVAILLMKYFICSICAS*CFYYFYIR 413
           K+ PVAIL     IC  CA   F+ FY R
Sbjct: 14  KVGPVAILKRTRGICQSCAFKLFHRFYFR 42


>SB_10759| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 316

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 260 EQTDANMDVNRLERTLSPV--NDC*NVASRYTAYEIFHLFNL 379
           +QTDA     R   T  PV  ++C    + Y + E++H FN+
Sbjct: 270 QQTDAGDTSTRTYETYHPVKCSECGTEVAVYDSDEVYHFFNI 311


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,826,077
Number of Sequences: 59808
Number of extensions: 238401
Number of successful extensions: 532
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)