Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O04
         (346 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_52779| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.4  
SB_17457| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.26)           27   5.4  
SB_58745| Best HMM Match : rve (HMM E-Value=0.0023)                    26   7.1  
SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.1  
SB_36624| Best HMM Match : Glyco_hydro_20 (HMM E-Value=1.1e-13)        26   7.1  
SB_31316| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.4  
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)              26   9.4  
SB_4599| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   9.4  

>SB_52779| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 89

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +3

Query: 174 CINTMTYSFFWNHIWQWKSTMQLIQYH 254
           C N+    F W   W W     +++YH
Sbjct: 36  CRNSCLLRFCWQSSWIWSLVPNVLEYH 62


>SB_17457| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.26)
          Length = 889

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 128 IFLQFIAISLSHISILYQHHDL*FLLESYLAVEIDHATNTVPSFVSSNI 274
           +FL F+A   S+  I+Y+   L FL  S +A  +  +     +FVS  +
Sbjct: 213 VFLAFVAGVFSNSYIVYEDSGLTFLTSSMVAFNVIFSIAQPKAFVSKPV 261


>SB_58745| Best HMM Match : rve (HMM E-Value=0.0023)
          Length = 943

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 162 IFPYCINTMTYSFFWNHIW 218
           +FPYC  T TY    + +W
Sbjct: 754 LFPYCAYTYTYKMIADRLW 772


>SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 438

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 162 IFPYCINTMTYSFFWNHIW 218
           +FPYC  T TY    + +W
Sbjct: 154 LFPYCAYTYTYKMIADQLW 172


>SB_36624| Best HMM Match : Glyco_hydro_20 (HMM E-Value=1.1e-13)
          Length = 362

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 171 YCINTMTYSFFWNHIWQW 224
           Y  N   Y++ W+++W+W
Sbjct: 139 YLPNRNVYAYAWDNVWEW 156


>SB_31316| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 383

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 162 IFPYCINTMTYSFFWNHIW 218
           +FPYC  T TY      +W
Sbjct: 82  LFPYCAYTYTYQIIAEQLW 100


>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
          Length = 1788

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 180  NTMTYSFFWNHIWQWKS 230
            N M Y+  WN+IW+W S
Sbjct: 1390 NVMAYA--WNNIWEWGS 1404


>SB_4599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 484

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 162 IFPYCINTMTYSFFWNHIW 218
           +FPYC  T TY    + +W
Sbjct: 115 LFPYCAYTHTYKMIADQLW 133


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,270,861
Number of Sequences: 59808
Number of extensions: 136401
Number of successful extensions: 237
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 510674393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)