Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O04
         (346 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063406-1|AAH63406.1|  233|Homo sapiens hypothetical protein LO...    36   0.034
Z98258-1|CAM26478.1|  235|Homo sapiens chromosome 16 open readin...    35   0.059
BC002624-1|AAH02624.1|  235|Homo sapiens chromosome 16 open read...    35   0.059
BC001181-1|AAH01181.1|  235|Homo sapiens chromosome 16 open read...    35   0.059
AE006464-16|AAK61248.1|  235|Homo sapiens similar to FBan0003337...    35   0.059
BT007049-1|AAP35698.1|  286|Homo sapiens ceroid-lipofuscinosis, ...    28   6.8  
BC007725-1|AAH07725.1|  286|Homo sapiens ceroid-lipofuscinosis, ...    28   6.8  
AF123761-1|AAF13119.1|  286|Homo sapiens putative transmembrane ...    28   9.0  
AF123760-1|AAF13118.1|  286|Homo sapiens putative transmembrane ...    28   9.0  
AF123759-1|AAF13117.1|  286|Homo sapiens putative transmembrane ...    28   9.0  
AF123758-1|AAF13116.1|  286|Homo sapiens putative transmembrane ...    28   9.0  
AF123757-1|AAF13115.1|  286|Homo sapiens putative transmembrane ...    28   9.0  

>BC063406-1|AAH63406.1|  233|Homo sapiens hypothetical protein
           LOC134145 protein.
          Length = 233

 Score = 35.9 bits (79), Expect = 0.034
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 230 RFPLPNMIPEETIGHGVDTVWKY 162
           RFP P+  P+   G G+DTVW Y
Sbjct: 187 RFPFPHWTPDHVTGEGIDTVWAY 209


>Z98258-1|CAM26478.1|  235|Homo sapiens chromosome 16 open reading
           frame 24 protein.
          Length = 235

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 233 GRFPLPNMIPEETIGHGVDTVWKY 162
           GRFPLP   P   +G G+D VW Y
Sbjct: 174 GRFPLPTWQPVTAVGEGLDRVWAY 197


>BC002624-1|AAH02624.1|  235|Homo sapiens chromosome 16 open reading
           frame 24 protein.
          Length = 235

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 233 GRFPLPNMIPEETIGHGVDTVWKY 162
           GRFPLP   P   +G G+D VW Y
Sbjct: 174 GRFPLPTWQPVTAVGEGLDRVWAY 197


>BC001181-1|AAH01181.1|  235|Homo sapiens chromosome 16 open reading
           frame 24 protein.
          Length = 235

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 233 GRFPLPNMIPEETIGHGVDTVWKY 162
           GRFPLP   P   +G G+D VW Y
Sbjct: 174 GRFPLPTWQPVTAVGEGLDRVWAY 197


>AE006464-16|AAK61248.1|  235|Homo sapiens similar to FBan0003337
           protein.
          Length = 235

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 233 GRFPLPNMIPEETIGHGVDTVWKY 162
           GRFPLP   P   +G G+D VW Y
Sbjct: 174 GRFPLPTWQPVTAVGEGLDRVWAY 197


>BT007049-1|AAP35698.1|  286|Homo sapiens ceroid-lipofuscinosis,
           neuronal 8 (epilepsy, progressive with mental retardatio
           protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 159 HIFPYCINTMTYSFFWNHIWQWKSTMQLIQYHHLYL 266
           H+F +C   +TY  +W   W W   +  +   HL L
Sbjct: 199 HMF-HCRMVLTYHMWWVCFWHWDGLVSSLYLPHLTL 233


>BC007725-1|AAH07725.1|  286|Homo sapiens ceroid-lipofuscinosis,
           neuronal 8 (epilepsy, progressive with mental retardatio
           protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 159 HIFPYCINTMTYSFFWNHIWQWKSTMQLIQYHHLYL 266
           H+F +C   +TY  +W   W W   +  +   HL L
Sbjct: 199 HMF-HCRMVLTYHMWWVCFWHWDGLVSSLYLPHLTL 233


>AF123761-1|AAF13119.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 159 HIFPYCINTMTYSFFWNHIWQWKSTMQLIQYHHLYL 266
           H+F +C   +TY  +W   W W   +  +   HL L
Sbjct: 199 HMF-HCRMVLTYHMWWVCFWHWDGLVSNLYLPHLTL 233


>AF123760-1|AAF13118.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 159 HIFPYCINTMTYSFFWNHIWQWKSTMQLIQYHHLYL 266
           H+F +C   +TY  +W   W W   +  +   HL L
Sbjct: 199 HMF-HCRMVLTYHMWWVCFWHWDGLVSNLYLPHLTL 233


>AF123759-1|AAF13117.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 159 HIFPYCINTMTYSFFWNHIWQWKSTMQLIQYHHLYL 266
           H+F +C   +TY  +W   W W   +  +   HL L
Sbjct: 199 HMF-HCRMVLTYHMWWVCFWHWDGLVSNLYLPHLTL 233


>AF123758-1|AAF13116.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 159 HIFPYCINTMTYSFFWNHIWQWKSTMQLIQYHHLYL 266
           H+F +C   +TY  +W   W W   +  +   HL L
Sbjct: 199 HMF-HCRMVLTYHMWWVCFWHWDGLVSNLYLPHLTL 233


>AF123757-1|AAF13115.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 159 HIFPYCINTMTYSFFWNHIWQWKSTMQLIQYHHLYL 266
           H+F +C   +TY  +W   W W   +  +   HL L
Sbjct: 199 HMF-HCRMVLTYHMWWVCFWHWDGLVSNLYLPHLTL 233


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,758,778
Number of Sequences: 237096
Number of extensions: 637294
Number of successful extensions: 884
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)