Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O03
(415 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P33514 Cluster: 40S ribosomal protein S7; n=94; Eukaryo... 215 3e-55
UniRef50_P62081 Cluster: 40S ribosomal protein S7; n=154; Eukary... 200 1e-50
UniRef50_Q8IMI7 Cluster: CG1883-PB, isoform B; n=1; Drosophila m... 168 3e-41
UniRef50_Q2H803 Cluster: 40S ribosomal protein S7; n=6; Pezizomy... 147 9e-35
UniRef50_Q8LJU5 Cluster: 40S ribosomal protein S7; n=6; Viridipl... 132 2e-30
UniRef50_Q1KYN5 Cluster: Small subunit ribosomal protein 7; n=1;... 125 4e-28
UniRef50_Q5DDX3 Cluster: SJCHGC02315 protein; n=1; Schistosoma j... 116 3e-25
UniRef50_Q5CRF0 Cluster: 40S ribosomal protein S7; n=2; Cryptosp... 108 4e-23
UniRef50_UPI000150A71E Cluster: hypothetical protein TTHERM_0047... 104 6e-22
UniRef50_Q8IET7 Cluster: 40S ribosomal protein S7 homologue, put... 102 3e-21
UniRef50_Q4N1A2 Cluster: 40S ribosomal protein S7, putative; n=3... 100 1e-20
UniRef50_A0CGP8 Cluster: Chromosome undetermined scaffold_18, wh... 96 2e-19
UniRef50_A4H367 Cluster: Ribosomal protein S7, putative; n=8; Tr... 87 1e-16
UniRef50_A2DDU5 Cluster: 40S ribosomal protein S7, putative; n=3... 87 1e-16
UniRef50_Q7QTP2 Cluster: GLP_0_7665_7093; n=1; Giardia lamblia A... 76 3e-13
UniRef50_A5B8N7 Cluster: Putative uncharacterized protein; n=1; ... 65 6e-10
UniRef50_Q0E1M6 Cluster: Os02g0324500 protein; n=6; Magnoliophyt... 59 3e-08
UniRef50_Q6Z6T1 Cluster: Putative ribosomal protein S7; n=1; Ory... 55 5e-07
UniRef50_UPI000155BB5D Cluster: PREDICTED: similar to ribosomal ... 38 0.11
UniRef50_Q9TAK8 Cluster: NADH-ubiquinone oxidoreductase chain 4;... 36 0.33
UniRef50_Q3LWI2 Cluster: Ribosomal protein S7; n=1; Bigelowiella... 35 0.57
UniRef50_Q62BZ5 Cluster: Sensor protein; n=31; Burkholderiaceae|... 34 1.0
UniRef50_O27285 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_A3DMF5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_A4J7Z7 Cluster: ErfK/YbiS/YcfS/YnhG family protein prec... 34 1.3
UniRef50_Q7RG08 Cluster: Aggrecan keratan sulfate domain-related... 34 1.3
UniRef50_Q7QYG0 Cluster: GLP_162_9792_8569; n=1; Giardia lamblia... 33 1.8
UniRef50_Q9Z4X6 Cluster: CDA peptide synthetase I; n=4; cellular... 32 4.0
UniRef50_Q88FP0 Cluster: VgrG protein; n=8; Pseudomonas putida|R... 32 4.0
UniRef50_UPI0000DD838C Cluster: PREDICTED: similar to kidney-spe... 32 5.3
UniRef50_Q92DP1 Cluster: Lin0772 protein; n=2; Listeria|Rep: Lin... 32 5.3
UniRef50_A6TMM5 Cluster: ErfK/YbiS/YcfS/YnhG family protein; n=1... 32 5.3
UniRef50_A6TLN0 Cluster: Putative uncharacterized protein; n=1; ... 32 5.3
UniRef50_A1FT54 Cluster: DoxX precursor; n=8; Proteobacteria|Rep... 32 5.3
UniRef50_A5K1Z4 Cluster: Putative uncharacterized protein; n=3; ... 32 5.3
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 31 7.1
UniRef50_Q6CEF0 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 31 7.1
UniRef50_O21037 Cluster: Mitochondrial 60S ribosomal protein L6;... 31 7.1
UniRef50_O13921 Cluster: MutS protein homolog 1; n=3; Schizosacc... 31 7.1
UniRef50_A2A128 Cluster: Rhamnose binding lectin precursor; n=1;... 31 9.3
UniRef50_Q0AWE3 Cluster: ErfK/YbiS/YcfS/YnhG; n=1; Syntrophomona... 31 9.3
UniRef50_A6CRN1 Cluster: Putative uncharacterized protein; n=1; ... 31 9.3
UniRef50_A3Y850 Cluster: VgrG protein; n=2; Marinomonas sp. MED1... 31 9.3
UniRef50_Q23FW9 Cluster: Putative uncharacterized protein; n=2; ... 31 9.3
UniRef50_A2D9Z4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.3
UniRef50_Q99246 Cluster: Voltage-dependent L-type calcium channe... 31 9.3
>UniRef50_P33514 Cluster: 40S ribosomal protein S7; n=94;
Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles
gambiae (African malaria mosquito)
Length = 192
Score = 215 bits (525), Expect = 3e-55
Identities = 103/119 (86%), Positives = 109/119 (91%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 182
Q RLVRELEKKFSGKHVVF+ +R+ILPKP R NKQKRPRSRTLT+VYDAILEDLVF
Sbjct: 74 QTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSRTLTAVYDAILEDLVF 133
Query: 183 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 359
PAE+VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFPE YL
Sbjct: 134 PAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEFPENYL 192
>UniRef50_P62081 Cluster: 40S ribosomal protein S7; n=154;
Eukaryota|Rep: 40S ribosomal protein S7 - Homo sapiens
(Human)
Length = 194
Score = 200 bits (487), Expect = 1e-50
Identities = 92/116 (79%), Positives = 105/116 (90%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 182
Q+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVF
Sbjct: 76 QVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVF 135
Query: 183 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 350
P+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 136 PSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>UniRef50_Q8IMI7 Cluster: CG1883-PB, isoform B; n=1; Drosophila
melanogaster|Rep: CG1883-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 250
Score = 168 bits (409), Expect = 3e-41
Identities = 82/95 (86%), Positives = 87/95 (91%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 182
QI LVRELEKKFSGKHVV + +RKILPKP+ K R KQKRPRSRTLT+VYDAILEDLVF
Sbjct: 74 QIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVF 133
Query: 183 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 287
PAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 134 PAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168
>UniRef50_Q2H803 Cluster: 40S ribosomal protein S7; n=6;
Pezizomycotina|Rep: 40S ribosomal protein S7 -
Chaetomium globosum (Soil fungus)
Length = 203
Score = 147 bits (356), Expect = 9e-35
Identities = 69/118 (58%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVAN--KQKRPRSRTLTSVYDAILEDL 176
Q RL RELEKKFS +HV+ + R+ILP+P +R N KQKRPRSRTLT+V+DAIL DL
Sbjct: 80 QQRLTRELEKKFSDRHVLILASRRILPRPKRSSRSRNTLKQKRPRSRTLTAVHDAILTDL 139
Query: 177 VFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 350
VFP EIVGKR+R K DGS+ +KV LD+ ++ +++++DT+ VY++LTGR V FEFP+
Sbjct: 140 VFPVEIVGKRLRTKEDGSKTLKVILDEKERGGVDYRLDTYSEVYRRLTGRGVIFEFPQ 197
>UniRef50_Q8LJU5 Cluster: 40S ribosomal protein S7; n=6;
Viridiplantae|Rep: 40S ribosomal protein S7 - Oryza
sativa subsp. japonica (Rice)
Length = 192
Score = 132 bits (320), Expect = 2e-30
Identities = 62/114 (54%), Positives = 86/114 (75%)
Frame = +3
Query: 6 IRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 185
+RLVRELEKKFSGK VV V R+I+ P + V RPR+RTLT+V+D ILED+V+P
Sbjct: 78 VRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVV----RPRTRTLTAVHDGILEDVVYP 133
Query: 186 AEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 347
AEIVGKR+R LDG +++K+ LD ++ E+K+DTF SVY++L G++V F++P
Sbjct: 134 AEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGKDVVFDYP 187
>UniRef50_Q1KYN5 Cluster: Small subunit ribosomal protein 7; n=1;
Streblomastix strix|Rep: Small subunit ribosomal protein
7 - Streblomastix strix
Length = 189
Score = 125 bits (301), Expect = 4e-28
Identities = 58/114 (50%), Positives = 85/114 (74%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 182
Q +LV ELEKK +GKHV+ V R+I+PKP + Q RPR+RTL +V++ IL+DL +
Sbjct: 76 QPQLVAELEKKLTGKHVLIVAKRRIIPKPKRGHKYT--QPRPRTRTLANVHERILDDLCY 133
Query: 183 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 344
PAEIVGKRIR +LDGS+++KV LD + ++ K+++ ++VY+KLTG++ FEF
Sbjct: 134 PAEIVGKRIRYRLDGSKILKVQLDNKVKNDLKPKLESLRAVYQKLTGKQAAFEF 187
>UniRef50_Q5DDX3 Cluster: SJCHGC02315 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02315 protein - Schistosoma
japonicum (Blood fluke)
Length = 196
Score = 116 bits (278), Expect = 3e-25
Identities = 56/103 (54%), Positives = 73/103 (70%)
Frame = +3
Query: 9 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 188
RLV ELEKK G HVV + R+I+ KP + KQKRPRSRTLT+V++AIL+DLV+PA
Sbjct: 84 RLVGELEKKLRGPHVVLLAFRRIIAKPKRNCKFNPKQKRPRSRTLTAVHEAILKDLVYPA 143
Query: 189 EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKL 317
EIVGKR +V+ DGS LIK HLD Q+ IE + + + +K+
Sbjct: 144 EIVGKRTQVRCDGSTLIKCHLDVAQRNYIETQAQNYHGIIQKI 186
>UniRef50_Q5CRF0 Cluster: 40S ribosomal protein S7; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S7 -
Cryptosporidium parvum Iowa II
Length = 204
Score = 108 bits (260), Expect = 4e-23
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 182
Q R++ ELEKK VV +G R ILP+ K + RPRSRTLT+V+DA+LED+
Sbjct: 80 QGRIIAELEKKLKCP-VVMIGQRSILPRNYRKYGF---KSRPRSRTLTAVHDALLEDICG 135
Query: 183 PAEIVGKRIRVKLDGSQLIKVHLD-KNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 347
P++IVGKR+R ++DGS L+KV LD K++ I KVD F +VYK+LT +E F FP
Sbjct: 136 PSDIVGKRLRYRVDGSTLLKVILDPKDKDKDIADKVDVFGAVYKRLTNKEAEFSFP 191
>UniRef50_UPI000150A71E Cluster: hypothetical protein
TTHERM_00471090; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00471090 - Tetrahymena
thermophila SB210
Length = 197
Score = 104 bits (250), Expect = 6e-22
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Frame = +3
Query: 9 RLVRELEKKFSGKHVVFVGDRKILPK--PSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 182
+L+ ELEKK + V F RKI K HK+ Q+RPRSR LT VYDA+L+DL+
Sbjct: 79 KLIIELEKKLK-QIVFFTAQRKIESKWVKEHKS-----QQRPRSRCLTYVYDALLDDLLL 132
Query: 183 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 350
P+ ++GKRIR +LDG+ ++ LD+N + +E K+D +YK +T REVTFEF E
Sbjct: 133 PSTLIGKRIRARLDGTSFYRIQLDQNDRDFLEEKLDAITHIYKTVTTREVTFEFKE 188
>UniRef50_Q8IET7 Cluster: 40S ribosomal protein S7 homologue,
putative; n=6; Plasmodium|Rep: 40S ribosomal protein S7
homologue, putative - Plasmodium falciparum (isolate
3D7)
Length = 194
Score = 102 bits (245), Expect = 3e-21
Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 4/119 (3%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKR--PRSRTLTSVYDAILEDL 176
Q +L+ ELEKK + K+VV V R IL K + NK + PRSRTLTSVYD+ILED+
Sbjct: 77 QRKLINELEKK-TKKYVVLVAKRTIL-----KGKQKNKSFKIIPRSRTLTSVYDSILEDI 130
Query: 177 VFPAEIVGKRIRVKLDGSQLIKVHLD--KNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 347
V P+EI+GKRI +K DG ++ K+ LD + Q+ IE K+ +F +VYKK+T R+ F P
Sbjct: 131 VSPSEIIGKRISMKADGKRVFKIMLDSKERQRDNIEEKLISFAAVYKKITRRDAVFSLP 189
>UniRef50_Q4N1A2 Cluster: 40S ribosomal protein S7, putative; n=3;
Piroplasmida|Rep: 40S ribosomal protein S7, putative -
Theileria parva
Length = 202
Score = 100 bits (240), Expect = 1e-20
Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Frame = +3
Query: 9 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 188
RL+ ELEKK + +HV V RKI+ K + +KRPR+RTLTSV++A+LED+ P
Sbjct: 89 RLLIELEKK-TKRHVFIVSQRKIMSKQFNNKAF---RKRPRNRTLTSVHEAVLEDIAAPT 144
Query: 189 EIVGKRIRVKLDGSQLIKVHLD--KNQQTTIEHKVDTFQSVYKKLTGREVTFEF 344
EIVGK R++ DG++++KV LD Q +E K++T +VYKKLT +E F F
Sbjct: 145 EIVGKVTRMRQDGTRVLKVFLDPKDRQNDNVEDKLETLSAVYKKLTNKEAVFTF 198
>UniRef50_A0CGP8 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 265
Score = 96.3 bits (229), Expect = 2e-19
Identities = 47/112 (41%), Positives = 74/112 (66%)
Frame = +3
Query: 9 RLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPA 188
+L+ ELEK+ K + V ++ + K+ Q RP SRTLTSVYD +LEDL+ P+
Sbjct: 140 KLLPELEKRV--KATILVAAKRTIESKWVKSH--RSQTRPNSRTLTSVYDGLLEDLISPS 195
Query: 189 EIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 344
I+G+R RV++DG++ ++ LD++ Q +EH++D + VYK LT R++ FEF
Sbjct: 196 VILGRRTRVRVDGTKFYRIFLDESDQKELEHRLDAIKDVYKVLTTRDLEFEF 247
>UniRef50_A4H367 Cluster: Ribosomal protein S7, putative; n=8;
Trypanosomatidae|Rep: Ribosomal protein S7, putative -
Leishmania braziliensis
Length = 242
Score = 87.4 bits (207), Expect = 1e-16
Identities = 47/114 (41%), Positives = 70/114 (61%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 182
Q L ELEK+ G V+ V RKI +P+ V QK RS+T ++V++ IL DL++
Sbjct: 120 QRALTSELEKRHPGYLVMLVAQRKITKRPND---VYKLQKVQRSKTSSAVFENILNDLIY 176
Query: 183 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 344
P+++VG+R R + DGS+L+KV LD + IE ++ VYK+LT R +F F
Sbjct: 177 PSDVVGRRWRYRTDGSKLMKVFLDARDRKRIESRLRAVAYVYKQLTHRRASFGF 230
>UniRef50_A2DDU5 Cluster: 40S ribosomal protein S7, putative; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S7,
putative - Trichomonas vaginalis G3
Length = 186
Score = 87.0 bits (206), Expect = 1e-16
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPK-PSHKTRVANKQKRPRSRTLTSVYDAILEDLV 179
Q + + +LEKK + + V VG + PK P H R K R RTL SV DAIL+DLV
Sbjct: 72 QAQFLPDLEKKLNAQ-VCIVGQHRAFPKTPEHGRRF--KAIRNYGRTLRSVNDAILDDLV 128
Query: 180 FPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 341
FP IVGKRI + G Q +V LDK+ T +E +++ F + Y +LTG FE
Sbjct: 129 FPTAIVGKRIHYDVSGKQQTRVILDKHDATRVEERLNGFGAAYNRLTGLNTVFE 182
>UniRef50_Q7QTP2 Cluster: GLP_0_7665_7093; n=1; Giardia lamblia ATCC
50803|Rep: GLP_0_7665_7093 - Giardia lamblia ATCC 50803
Length = 190
Score = 76.2 bits (179), Expect = 3e-13
Identities = 39/111 (35%), Positives = 62/111 (55%)
Frame = +3
Query: 12 LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAE 191
L+ +LEK SG + V +R I+ K ++ +RPRSRT+TSVY+ IL+D+ +P
Sbjct: 80 LILKLEKNHSGHRFIIVANRTIM-KNAYVFTGKKSIRRPRSRTMTSVYNCILDDICYPIH 138
Query: 192 IVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEF 344
++GKR + ++V L K + + T+ +VYK LT R+ F F
Sbjct: 139 VIGKRTLYPAGSNPRLQVVLPKAVYNEVSERTKTYSAVYKALTERDTEFIF 189
>UniRef50_A5B8N7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 370
Score = 64.9 bits (151), Expect = 6e-10
Identities = 28/60 (46%), Positives = 44/60 (73%)
Frame = +3
Query: 168 EDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 347
ED+V AE+VGKRIR +L+GS++IK+ L ++ E+K++TF VYKK + ++V E+P
Sbjct: 212 EDIVLLAEVVGKRIRCRLNGSRIIKIFLGPKERDNTEYKLETFVVVYKKPSSQDVALEYP 271
>UniRef50_Q0E1M6 Cluster: Os02g0324500 protein; n=6;
Magnoliophyta|Rep: Os02g0324500 protein - Oryza sativa
subsp. japonica (Rice)
Length = 93
Score = 59.3 bits (137), Expect = 3e-08
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +3
Query: 6 IRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 185
+RLV+ELEKKFSGK VVF R+I+ +P +K + PR+RTL +V+D ILED+V
Sbjct: 27 VRLVKELEKKFSGKDVVFDATRRIV-RPLNKGSAVH---HPRTRTLITVHDGILEDVVSQ 82
Query: 186 AEIVG 200
++G
Sbjct: 83 LRLLG 87
>UniRef50_Q6Z6T1 Cluster: Putative ribosomal protein S7; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S7 - Oryza sativa subsp. japonica (Rice)
Length = 112
Score = 55.2 bits (127), Expect = 5e-07
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 6 IRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILED 173
+RLV+ELEKKFSGK VVF R+I+ +P +K + PR+RTL +V+D ILED
Sbjct: 27 VRLVKELEKKFSGKDVVFDATRRIV-RPLNKGSAVH---HPRTRTLITVHDGILED 78
Score = 40.3 bits (90), Expect = 0.015
Identities = 17/40 (42%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Frame = +3
Query: 234 LIKVH--LDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 347
LI VH + ++++ IE+K++TF +VY++L G++V FE+P
Sbjct: 68 LITVHDGILEDERNNIEYKLETFFAVYRRLCGKDVAFEYP 107
>UniRef50_UPI000155BB5D Cluster: PREDICTED: similar to ribosomal
protein S7, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein S7, partial -
Ornithorhynchus anatinus
Length = 89
Score = 37.5 bits (83), Expect = 0.11
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 69 RKILPKPSHKTRVANKQKRPR 131
R+ILPKP+ K+R NKQKRPR
Sbjct: 30 RRILPKPTRKSRTKNKQKRPR 50
>UniRef50_Q9TAK8 Cluster: NADH-ubiquinone oxidoreductase chain 4;
n=1; Cafeteria roenbergensis|Rep: NADH-ubiquinone
oxidoreductase chain 4 - Cafeteria roenbergensis
Length = 453
Score = 35.9 bits (79), Expect = 0.33
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = -1
Query: 223 SSFTLMRLPTISAGNTRSSNMASYTEVSVLERGLFCLLATRVLWLGL 83
+++TL L ++ GN +S + SY +V+ LE +FCLL ++ +G+
Sbjct: 387 AAYTLWALNRVNFGNLKSQYILSYGDVNRLEFYIFCLLVILMILMGI 433
>UniRef50_Q3LWI2 Cluster: Ribosomal protein S7; n=1; Bigelowiella
natans|Rep: Ribosomal protein S7 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 183
Score = 35.1 bits (77), Expect = 0.57
Identities = 24/96 (25%), Positives = 42/96 (43%)
Frame = +3
Query: 3 QIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVF 182
Q ++E E ++ + R I P K S + T+V D I+ D++F
Sbjct: 72 QYFFIKEFESYIPNTYLSVLSIRTIKPLKYQKISKTGSY----SWSFTNVADDIIRDMLF 127
Query: 183 PAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 290
P IVGKRI + I+++L+ + K++
Sbjct: 128 PGNIVGKRIFFFSNEDVFIQIYLEDKYKNFNNSKIN 163
>UniRef50_Q62BZ5 Cluster: Sensor protein; n=31;
Burkholderiaceae|Rep: Sensor protein - Burkholderia
mallei (Pseudomonas mallei)
Length = 501
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 226 PSSFTLMRLPTISAGNTRSSNMASYTEV---SVLERGLFCLLATRVLWLGLGRILRSPTN 56
PS+ T R+ + G T + A E+ S+L+ GL +LA ++WLG+GR LR P N
Sbjct: 138 PSART--RVVWVMVGETIEARQALAREILVGSLLQEGLLVVLALGIVWLGVGRGLR-PLN 194
>UniRef50_O27285 Cluster: Putative uncharacterized protein; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Putative uncharacterized protein - Methanobacterium
thermoautotrophicum
Length = 183
Score = 34.3 bits (75), Expect = 1.0
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +3
Query: 159 AILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 329
++ ED++ PA I G I DG + K+ + + + K++T ++ + LTG +
Sbjct: 119 SVAEDVLAPARISGINIVFGKDGEERFKIRVMREDARRVPGKLETLNNIIEMLTGEK 175
>UniRef50_A3DMF5 Cluster: Putative uncharacterized protein; n=1;
Staphylothermus marinus F1|Rep: Putative uncharacterized
protein - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 165
Score = 34.3 bits (75), Expect = 1.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +3
Query: 162 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 341
++E +++PA ++G DGS+ + + + + I + ++S+ KL GR+V
Sbjct: 104 LVEQILYPATLLGLNTLWLPDGSEQMIIRISRRDHRFIGGRKHAYESLLSKLLGRKVRIR 163
Query: 342 F 344
F
Sbjct: 164 F 164
>UniRef50_A4J7Z7 Cluster: ErfK/YbiS/YcfS/YnhG family protein
precursor; n=1; Desulfotomaculum reducens MI-1|Rep:
ErfK/YbiS/YcfS/YnhG family protein precursor -
Desulfotomaculum reducens MI-1
Length = 315
Score = 33.9 bits (74), Expect = 1.3
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -2
Query: 189 RPGIPDLPI--WRHIQKSVSWNGAFSVCWLHVSCGWAWAGSYGHQRTQHAYR*TSFLTHG 16
+P P P+ W+ + K+ +W F WL ++ W G YG T + S+ +HG
Sbjct: 158 KPSTPS-PVGSWQVVHKATNWGTGFGTRWLGLNVPW---GKYGIHGTNKPFSIGSYASHG 213
>UniRef50_Q7RG08 Cluster: Aggrecan keratan sulfate domain-related;
n=2; Plasmodium (Vinckeia)|Rep: Aggrecan keratan sulfate
domain-related - Plasmodium yoelii yoelii
Length = 268
Score = 33.9 bits (74), Expect = 1.3
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 81 PKPSHKTRVANKQKRPRSRT-LTSVYDAILEDLVFPAEIVGKRIR-VKLDGSQLIKVHLD 254
PKPS + + +NK + S T + ++D +LED+ + K+ K + ++ +K ++
Sbjct: 172 PKPSEEPKSSNKNEGETSNTSINKIFDKVLEDITKCGSEINKQYNSAKEELTKKVK-DIE 230
Query: 255 KNQQTTIEHKVDTFQSVYK 311
K+ Q + + T++ + K
Sbjct: 231 KDIQPVVGETIKTYKGMVK 249
>UniRef50_Q7QYG0 Cluster: GLP_162_9792_8569; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_162_9792_8569 - Giardia lamblia ATCC
50803
Length = 407
Score = 33.5 bits (73), Expect = 1.8
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 21 ELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLV 179
EL K SG V G++ +P+PSH T + + T+ +V+D I +D V
Sbjct: 314 ELTKTKSGLSVELKGEQTNIPRPSHSTSLFYPYHNACADTIRAVHDRINKDAV 366
>UniRef50_Q9Z4X6 Cluster: CDA peptide synthetase I; n=4; cellular
organisms|Rep: CDA peptide synthetase I - Streptomyces
coelicolor
Length = 7463
Score = 32.3 bits (70), Expect = 4.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 66 DRKILPKPSHKTRVANKQKR-PRSRTLTSVYDAIL 167
DRK LP P + R + + R PR R LT+++ IL
Sbjct: 3245 DRKALPAPDYSARTSGRAARDPRERLLTALFGEIL 3279
>UniRef50_Q88FP0 Cluster: VgrG protein; n=8; Pseudomonas putida|Rep:
VgrG protein - Pseudomonas putida (strain KT2440)
Length = 771
Score = 32.3 bits (70), Expect = 4.0
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = -2
Query: 162 WRHIQKSVSW-----NGAFSVCWLHVSCGWAWAGSYG 67
W ++ S W N FS CW+ VS GWA GS+G
Sbjct: 408 WGRVKVSFPWDRESKNNEFSSCWVWVSQGWA-GGSWG 443
>UniRef50_UPI0000DD838C Cluster: PREDICTED: similar to
kidney-specific protein (KS); n=2; Homo sapiens|Rep:
PREDICTED: similar to kidney-specific protein (KS) -
Homo sapiens
Length = 824
Score = 31.9 bits (69), Expect = 5.3
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 304 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVLERG 125
T W ++ LCS++ W L CT + P L+ L T+S+ +S A +L++
Sbjct: 640 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 699
Query: 124 L 122
L
Sbjct: 700 L 700
>UniRef50_Q92DP1 Cluster: Lin0772 protein; n=2; Listeria|Rep:
Lin0772 protein - Listeria innocua
Length = 417
Score = 31.9 bits (69), Expect = 5.3
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = -1
Query: 202 LPTISAGNTRSSNMASYTEVSVLERGLFCLLATRVLWLGLGRILRSPTNTTCLPLNFFSN 23
+ +I N + + +SY+EVS+ ++ C+ + WL L +L + + L + +
Sbjct: 312 ITSIKFRNKSTDDESSYSEVSIRDKKNHCISVDNLYWLNLA-VLLDVKSVESMKLVLYKD 370
Query: 22 SRTSLI 5
+ TSL+
Sbjct: 371 NLTSLV 376
>UniRef50_A6TMM5 Cluster: ErfK/YbiS/YcfS/YnhG family protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep:
ErfK/YbiS/YcfS/YnhG family protein - Alkaliphilus
metalliredigens QYMF
Length = 280
Score = 31.9 bits (69), Expect = 5.3
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 189 RPGIPDLP-IWRHIQKSVSWNGAFSVCWLHVSCGWAWAGSYG 67
+P P P WR IQK+++ G F W+ ++ W G +G
Sbjct: 116 KPQTPTPPGDWRIIQKTLNPGGPFGTRWMRINIPWGGYGIHG 157
>UniRef50_A6TLN0 Cluster: Putative uncharacterized protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Putative
uncharacterized protein - Alkaliphilus metalliredigens
QYMF
Length = 130
Score = 31.9 bits (69), Expect = 5.3
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +3
Query: 18 RELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIV 197
RE++K +F G+R +L + HK +K K + L+ +Y ++++DL P
Sbjct: 38 REMKKSDWNSGNIFDGNRNLLSQYHHKLSFDDKIKNEQLNILSEMY-SLMKDLRNPISHS 96
Query: 198 GKRIRVKL 221
G R +K+
Sbjct: 97 GPRPTIKI 104
>UniRef50_A1FT54 Cluster: DoxX precursor; n=8; Proteobacteria|Rep:
DoxX precursor - Stenotrophomonas maltophilia R551-3
Length = 141
Score = 31.9 bits (69), Expect = 5.3
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = -1
Query: 292 VSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLP------TISAGNTRSSNMASYTEVSVLE 131
++TL V WFL+R L SS L + A + M + VL
Sbjct: 5 ITTLLDSRVLWFLARLLLAVVFLSSGLAKLLAWDNSVAEMQAAGLQPPVMFNIASAVVLL 64
Query: 130 RGLFCLLATRVLWLGLGRI 74
G CLL R+LWLG G +
Sbjct: 65 GGAVCLLLDRLLWLGSGAL 83
>UniRef50_A5K1Z4 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 2345
Score = 31.9 bits (69), Expect = 5.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 201 KRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKL 317
K ++ KL + +HL K + + H +F SVYKKL
Sbjct: 59 KNLQTKLKAISELILHLSKYDEDEVSHLFSSFTSVYKKL 97
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 31.5 bits (68), Expect = 7.1
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 75 ILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLD 254
+LPK S+KT P + YD + ++P E K+IR KLD +L+
Sbjct: 877 VLPK-SNKTEGFFPHLNPANHCEKDKYDDGTKIPIYPNEY--KKIRKKLDTYELVISEEK 933
Query: 255 KNQQTTIEH-KVDTFQ-SVYKKLTG 323
K ++ +EH V T Q VY+ ++G
Sbjct: 934 KEKKNLLEHINVLTSQIKVYESISG 958
>UniRef50_Q6CEF0 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 387
Score = 31.5 bits (68), Expect = 7.1
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +3
Query: 66 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKV 245
D K +H+ ++ N QKR T YD IL ++ F A + G + V++D ++
Sbjct: 240 DVKTFMVSNHELKLINTQKRRYIPTGIVCYDGILSEIHFCALLGGIDV-VEMDSAEADPS 298
Query: 246 HLDKNQQTTIEHKVDTFQSVYKKLTG 323
+T I+ V + +V K TG
Sbjct: 299 TPFNRMKTVIQDSVHSRYAVLYKQTG 324
>UniRef50_O21037 Cluster: Mitochondrial 60S ribosomal protein L6;
n=2; Dictyostelium|Rep: Mitochondrial 60S ribosomal
protein L6 - Dictyostelium discoideum (Slime mold)
Length = 170
Score = 31.5 bits (68), Expect = 7.1
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 192 IVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSV 305
++ K + VKL+GSQ+I ++K + TT + TF+ +
Sbjct: 110 LIPKEVVVKLEGSQIILYSINKEKVTTFASLLKTFKKI 147
>UniRef50_O13921 Cluster: MutS protein homolog 1; n=3;
Schizosaccharomyces pombe|Rep: MutS protein homolog 1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 941
Score = 31.5 bits (68), Expect = 7.1
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 135 RTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF-QSVYK 311
++L + YD + EDL ++ +GK+ ++ ++L VHL + TIE + F Q+V
Sbjct: 565 QSLFASYDKLQEDL---SKRLGKKATLRKSPAKLYYVHLKLSGNETIERFIKKFTQAVLF 621
Query: 312 KLTGREVTFEFP 347
+ T +F+ P
Sbjct: 622 QSTKSTASFQLP 633
>UniRef50_A2A128 Cluster: Rhamnose binding lectin precursor; n=1;
Tribolodon brandtii|Rep: Rhamnose binding lectin
precursor - Tribolodon brandtii
Length = 313
Score = 31.1 bits (67), Expect = 9.3
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -3
Query: 176 QIFQYGVIYRSQCPGTGPFLFVGYTCLVAGLGQDLTVTNEHNMLTAE 36
++F ++ C GT +L V Y CL L + N +N L E
Sbjct: 185 ELFATQTVFTDPCVGTYKYLTVSYFCLPTALRSSVICENANNTLICE 231
>UniRef50_Q0AWE3 Cluster: ErfK/YbiS/YcfS/YnhG; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep:
ErfK/YbiS/YcfS/YnhG - Syntrophomonas wolfei subsp.
wolfei (strain Goettingen)
Length = 283
Score = 31.1 bits (67), Expect = 9.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 162 WRHIQKSVSWNGAFSVCWLHVSCGWAWAGSYGHQR 58
W +QK+V+ G F W+ +S W G +G R
Sbjct: 130 WTIVQKTVNPGGPFGARWMRLSVPWGGYGIHGTNR 164
>UniRef50_A6CRN1 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. SG-1|Rep: Putative uncharacterized protein
- Bacillus sp. SG-1
Length = 140
Score = 31.1 bits (67), Expect = 9.3
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 102 RVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDK 257
+ AN + P+++ + + I+ DL+FP IV KR+ + G L HL K
Sbjct: 25 QAANAENGPQAKDMYVTTEDIVLDLIFP--IVDKRVIKEYGGGPLFDWHLQK 74
>UniRef50_A3Y850 Cluster: VgrG protein; n=2; Marinomonas sp.
MED121|Rep: VgrG protein - Marinomonas sp. MED121
Length = 850
Score = 31.1 bits (67), Expect = 9.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 123 FSVCWLHVSCGWAWAGSYGHQ 61
FS CW+ VS GWA G YG Q
Sbjct: 405 FSSCWMRVSQGWA-GGQYGMQ 424
>UniRef50_Q23FW9 Cluster: Putative uncharacterized protein; n=2;
Alveolata|Rep: Putative uncharacterized protein -
Tetrahymena thermophila SB210
Length = 1914
Score = 31.1 bits (67), Expect = 9.3
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 177 VFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSV 305
+FP+ + + IRV++D Q+ K +L+++ QT E + QS+
Sbjct: 1283 IFPSFVENEHIRVRVDNRQIYKRYLNQDYQTQDEFFENRDQSI 1325
>UniRef50_A2D9Z4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 320
Score = 31.1 bits (67), Expect = 9.3
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 24 LEKKFSGKHVVFVGDRKILPK-PSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAE-IV 197
+EKK + ++KI+ + + K +++ KQ+ S L S + +++DL A+ I
Sbjct: 167 VEKKQKDLEALTEHNKKIIDEYDACKKKLSGKQEFATSELLKS--EQLVKDLQTQAKKIE 224
Query: 198 GKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF 296
KR KL Q VH+ + + E K +TF
Sbjct: 225 QKREAQKLKAEQKKSVHMSSRRVSMTERKTETF 257
>UniRef50_Q99246 Cluster: Voltage-dependent L-type calcium channel
subunit alpha-1D; n=87; Euteleostomi|Rep:
Voltage-dependent L-type calcium channel subunit alpha-1D
- Mus musculus (Mouse)
Length = 2179
Score = 31.1 bits (67), Expect = 9.3
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 334 VTSRPVNFLYTDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMAS 155
+ +P + W +T S++V + L +PS + LPT + GN+ SN S
Sbjct: 1277 IAFKPKGYFSDAW--NTFDSLIVIGSIIDVALSEADPSESETIPLPTATPGNSEESNRIS 1334
Query: 154 YT 149
T
Sbjct: 1335 IT 1336
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,595,405
Number of Sequences: 1657284
Number of extensions: 8434758
Number of successful extensions: 26327
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 25622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26314
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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