Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O01
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   3.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 217 PIPRDAPVINNVLP 176
           P P +AP+  NVLP
Sbjct: 420 PTPPEAPLFQNVLP 433


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = -1

Query: 511 IKSYLFISVCDVPVREMADALFTRMSIPLNFFTASSIAFWICFSSLTSTIQGNAF 347
           I  +LF+ +CD  ++      + +    L +F  +     I  SS+T  +  N++
Sbjct: 13  IAGFLFLLICDSYLKIYHKEKYRKFCRILKYFIIAIYVLTILTSSVTLHVCFNSY 67


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 588 HILNLSPPLNMNPYWFSIHVAYTM 659
           H++  S PL  +PY+  + V  T+
Sbjct: 415 HVIMWSSPLTESPYFEKLDVKVTV 438


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -3

Query: 275 FGGNDNVGTIFRRFKSNCFTDTTR 204
           F G+ NVG    RF   C  D  R
Sbjct: 55  FAGSSNVGINKWRFLLQCLEDLDR 78


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 559 RHNFDAKNVPLVLMLCIKSY 500
           R  FD +  PL+L   I  Y
Sbjct: 790 RREFDKQKPPLILAAAISGY 809


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,311
Number of Sequences: 336
Number of extensions: 3566
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)