Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O01
(706 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 50 2e-06
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 44 2e-04
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 44 2e-04
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 38 0.006
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 36 0.032
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 36 0.042
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 35 0.056
SB_17921| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 34 0.13
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 32 0.52
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 31 0.69
SB_10195| Best HMM Match : CXC (HMM E-Value=0.003) 31 0.69
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 31 0.91
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 31 0.91
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 30 1.6
SB_25087| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_46540| Best HMM Match : RVT_1 (HMM E-Value=4.8e-27) 29 3.7
SB_15626| Best HMM Match : adh_short (HMM E-Value=3.8e-05) 29 3.7
SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6) 29 4.9
SB_11396| Best HMM Match : Ribosomal_S2 (HMM E-Value=0) 28 6.4
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/45 (60%), Positives = 29/45 (64%)
Frame = +3
Query: 168 KLAGRTLFITGASRXXXXXXXXXXXXXXXNVVIAAKTAEPHPKLP 302
KLAG+T+FITGASR NVVIAAKTAE HPKLP
Sbjct: 2 KLAGKTVFITGASRGIGKAIAVKVARDGANVVIAAKTAEAHPKLP 46
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/101 (29%), Positives = 49/101 (48%)
Frame = +3
Query: 381 EKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLASKLCL 560
++ +K I+D V F +D+LVNNAS T + + ++ + +N F S+
Sbjct: 77 QETARKLIEDTVTAFGQLDLLVNNASQFCPTESGSVQEETWNKLMGVNLSFPFFLSQAAF 136
Query: 561 PVLKSSNHAHILNLSPPLNMNPYWFSIHVAYTMAKYGMSMC 683
P LK S H I+N+ P + H Y ++K G+ MC
Sbjct: 137 PHLKRS-HGSIINMIDIHAERP--LANHSVYCVSKAGLHMC 174
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 45.2 bits (102), Expect = 5e-05
Identities = 34/152 (22%), Positives = 63/152 (41%)
Frame = +3
Query: 159 NTGKLAGRTLFITGASRXXXXXXXXXXXXXXXNVVIAAKTAEPHPKLPXXXXXXXXXXXX 338
NT +L G+T+ +TGA+ V++A + E K
Sbjct: 62 NTVRLHGKTVIVTGANSGIGKATALELARRGARVIMACRDLESAEK-----AASEIRYKV 116
Query: 339 XXXKALPCIVDVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHN 518
+ + +D+ ++K +D +++ +DILVNNA D ++
Sbjct: 117 PKAEVVCRFLDLNSLISVRKFAEDVMREEKRLDILVNNAGVYQPANKKTVD--GFETQFG 174
Query: 519 INTRGTFLASKLCLPVLKSSNHAHILNLSPPL 614
+N G FL + + L +LK+S + I+ +S L
Sbjct: 175 VNHLGHFLLTNMLLDLLKASAPSRIVVVSSRL 206
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 366 VDVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRY-DLMHNINTRGTFL 542
+DV + +++A++ ++ IDILVNNA IS G +T + N N G
Sbjct: 63 LDVSSDDSVEEALNAIYEEEGRIDILVNNAG-ISHIGMLETQTQSLVKETFNTNFFGVLR 121
Query: 543 ASKLCLPVLKSSNHAHILNLS 605
SK +P +KS + HI+N+S
Sbjct: 122 MSKAVIPRMKSDHSGHIINIS 142
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +3
Query: 363 IVDVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFL 542
+ D +Q + ++ A+K F ID++VNNA + + +DL+ ++ +G+FL
Sbjct: 71 VADYNSVEQGDQVVETAIKAFGRIDVVVNNAGILRDKSILRMSELDWDLVQRVHLKGSFL 130
Query: 543 ASKLCLPVLKSSNHAHIL 596
++ P +K I+
Sbjct: 131 VTRAAWPHMKKQKFGRII 148
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 366 VDVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTD-IKRYDLMHNINTRGTFL 542
+DV ++ + + + ID+LVNNA + L G +T + M N+N G
Sbjct: 256 LDVTSDESVTEVLQSIYSAERRIDVLVNNAG-VGLIGVLETHTMSLVREMFNVNFFGVVR 314
Query: 543 ASKLCLPVLKSSNHAHILNL 602
+K +P +K + HI+N+
Sbjct: 315 LTKAVIPKMKGNPSGHIINI 334
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/146 (22%), Positives = 57/146 (39%)
Frame = +3
Query: 168 KLAGRTLFITGASRXXXXXXXXXXXXXXXNVVIAAKTAEPHPKLPXXXXXXXXXXXXXXX 347
+L G+T+ ITGA+ V+I A+ +
Sbjct: 34 RLDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDR-----GNAAVRDIQASSGSQ 88
Query: 348 KALPCIVDVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINT 527
+ +D+ ++K + KK +DIL+NNA + D +++M +N
Sbjct: 89 QVFVEHLDLASLSSVRKFAEVINKKEERVDILMNNAGVAWIPFKRTED--GFEMMFGVNH 146
Query: 528 RGTFLASKLCLPVLKSSNHAHILNLS 605
FL + L L LK S + I+N+S
Sbjct: 147 LSHFLLTNLLLDKLKRSAPSRIINVS 172
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +3
Query: 408 DAVKKF----NGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLASKLCLPVLKS 575
+A+KKF + +D+L N A + + K++DL ++N + F +K C+P ++
Sbjct: 73 EAIKKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKMRQ 132
Query: 576 SNHAHILNLS 605
I+N++
Sbjct: 133 QGSGSIINMA 142
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 35.9 bits (79), Expect = 0.032
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 348 KALPCIVDVREEKQIQKAIDDAVKKFNGIDILVNNASAI-SLTGTSQTDIKRYDLMHNIN 524
+A+ DV +E+Q+ + + F +D+LVNNA + + Q ++ R+ + N
Sbjct: 58 RAIAVQADVADERQVMQLFARLDQHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATN 117
Query: 525 TRGTFLASKLCLPVL---KSSNHAHILNLS 605
G+FL + + + + N I+NLS
Sbjct: 118 VFGSFLCCREAIKRMSTRQGGNGGAIVNLS 147
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 35.5 bits (78), Expect = 0.042
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +3
Query: 441 LVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLASKLCLPVLKSSNHAHILNLSPPLNM 620
LVNNA ++ Y + +N GT +K LP+LK ++N+S M
Sbjct: 41 LVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREK-GRVVNISSVAGM 99
Query: 621 NPYWFSIHVAYTMAKYGMSM 680
P S AY ++K+G+S+
Sbjct: 100 VPLQRS--SAYCISKFGVSV 117
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 35.1 bits (77), Expect = 0.056
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 399 AIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLASKLCL-PVLKS 575
A++ +++ ID+LVNNA A++ + + ++ G FL S++ ++K
Sbjct: 106 ALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQ 165
Query: 576 SNHAHILNLSPPLNMNPYWFSIHVAYTMAKYGM 674
I+N++ P AYT AK+ +
Sbjct: 166 GQGGRIINITSVHEHTP--LPDASAYTAAKHAL 196
>SB_17921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 34.3 bits (75), Expect = 0.098
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +3
Query: 369 DVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGT 536
DVR+ +Q++ A+D+ V K DI++NNA+ ++ + + + + +I GT
Sbjct: 7 DVRDPEQVKAAVDECVAKSGLPDIVINNAAGNFISPSERLSANAWKTIVDIVLNGT 62
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 369 DVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMH--NINTRGTFL 542
DVR++ +++K + + + IL+NNA + TG + D+M +N+
Sbjct: 92 DVRKKDEVEKVANAVEDQAGNVTILINNAGVV--TGKKFLNCSESDVMRTFQVNSLAHIW 149
Query: 543 ASKLCLPVLKSSNHAHILNLS 605
+ +P + N HI++++
Sbjct: 150 TIQRFIPSMMEKNRGHIVSIA 170
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 33.1 bits (72), Expect = 0.23
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Frame = +3
Query: 363 IVDVREEKQIQKA---IDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRG 533
++DV + +QI+ A + + G+ L NNA + L + Y + +IN G
Sbjct: 85 LMDVTKHEQIEAAYAKVKSCLPPDTGLWALDNNAGYMGLGPLEWFTMDDYKMQADINLWG 144
Query: 534 TFLASKLCLPVLKSSNHAHILNLSPPLNM-NPYWFSIHVAYTMAKYGM 674
+K LP++K + ++N S + P ++ AY++ KYG+
Sbjct: 145 LIDVTKTFLPLIKVAK-GRVVNFSSIAGVATP---ALRAAYSVTKYGV 188
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = +3
Query: 366 VDVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLA 545
+DV ++ ++ + + V+K ID+LVNNA + + N G
Sbjct: 94 LDVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECATTDAINKVFEPNVYGLMRM 153
Query: 546 SKLCLPVLKSSNHAHILNLSPPLNM 620
+ +P +K H++N+ L +
Sbjct: 154 TNAVIPHMKKQRAGHVVNIGSVLGI 178
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +3
Query: 363 IVDVREEKQIQKAIDDAVKKF---NGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRG 533
++DV +QI +A + + G+ + NNA ++L + Y M ++N G
Sbjct: 438 LMDVTSHEQIIEAFEQVKRVLPSGTGLWAVYNNAGYMTLAPLEWFPLDDYKRMADVNLWG 497
Query: 534 TFLASKLCLPVLKSSNHAHILNLSPPLNMNPYWFSIHVAYTMAKYGMSMC--VLRNE 698
SK LP++K + ++N++ + + + Y++ KYG+ VLR E
Sbjct: 498 LVDVSKTFLPLVKMA-RGRVVNVASTVGLIAN--ELTAPYSITKYGVEAFSDVLRRE 551
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 31.9 bits (69), Expect = 0.52
Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 17/163 (10%)
Frame = +3
Query: 165 GKLAGRTLFITGASRXXXXXXXXXXXXXXXNVVIAAKTAEPHPKLPXXXXXXXXXXXXXX 344
G G+ +TG VVIA+++ K
Sbjct: 12 GLFDGKVAIVTGGGTGIGKAIAAELLSLGSKVVIASRSEGKLQKAAVDLEKFIPPSSSAE 71
Query: 345 XKALPCIVDVREEKQIQKAIDDAVKKF-----------------NGIDILVNNASAISLT 473
K +PC ++R+E Q+ ++ ++ + ID LVNN L
Sbjct: 72 VKVIPC--NIRKESQVTNLMESSMSSYYFSLKVTNLMKSTLSSYGRIDYLVNNGGGQFLC 129
Query: 474 GTSQTDIKRYDLMHNINTRGTFLASKLCLPVLKSSNHAHILNL 602
S K ++ + + N GTFL + S + I+N+
Sbjct: 130 PVSNMSYKGWNAVIDTNLNGTFLCCTEAYRLWMSEHGGSIVNI 172
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 31.5 bits (68), Expect = 0.69
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Frame = +3
Query: 357 PCIVDVREEKQIQKAIDDAVKKFNGIDILVNNASAI-SLTGTSQTDIKRYDLMHNINTRG 533
P + ++I + +DILVNNA + QTD + + +N
Sbjct: 1275 PAVASTPVREEIYATASRVKGEVGDVDILVNNAGILHGKRLLDQTDAQIQKAI-ELNLLA 1333
Query: 534 TFLASKLCLPVLKSSNHAHILNLSPPLNMNPYWFSIHVAYTMAKYG 671
F S+ L + N HI+ +S P F V Y +KYG
Sbjct: 1334 HFWTSRSFLGRMLEQNQGHIVTISSVSGSFPTAF--QVEYCASKYG 1377
>SB_10195| Best HMM Match : CXC (HMM E-Value=0.003)
Length = 1365
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 215 DTTRCSSYK*RPTSQFTGICDKTHIYDGTG*LHLEIKL 102
D TRC Y R + Q++ +C++T G G H EIKL
Sbjct: 1095 DATRCRRYVLR-SHQYSLLCEETSFVTGRGDRHREIKL 1131
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 31.1 bits (67), Expect = 0.91
Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 4/147 (2%)
Frame = +3
Query: 168 KLAGRTLFITGASRXXXXXXXXXXXXXXXNVVIAAKTAEPHPKLPXXXXXXXXXXXXXXX 347
KL GR +ITGAS +V++A+ ++
Sbjct: 39 KLYGRVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYN 98
Query: 348 KALPCIV---DVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQT-DIKRYDLMH 515
+V DV E + + + + FN IDIL+NN+ +T I+ M
Sbjct: 99 ADQDILVLPMDVTEYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAML 158
Query: 516 NINTRGTFLASKLCLPVLKSSNHAHIL 596
++N +K LP + + HI+
Sbjct: 159 DLNFLAVVSLTKAVLPHMIERKNGHIV 185
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/82 (19%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 363 IVDVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTS-QTDIKRYDLMHNINTRGTF 539
+VD+ ++ +++ + K F D ++NNA ++ + + +D + ++N +G+
Sbjct: 57 VVDITDDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSA 116
Query: 540 LASKLCLPVLKSSNHAHILNLS 605
+ LP + + I+N S
Sbjct: 117 NVIRSFLPKMIKAGKGVIVNFS 138
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = +3
Query: 387 QIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLASKLCLPV 566
Q A +D + G+ + NNA ++L + Y M ++N G +K LP+
Sbjct: 6 QAMNASEDMYEVSRGLWAVYNNAGFMTLAPLEWFPLDDYKRMADVNLWGLVDVTKTFLPL 65
Query: 567 LKSSNHAHILNLSPPLNMNPYWFSIHVAYTMAKYGM 674
+K + ++N+S + AY++ KYG+
Sbjct: 66 VKMA-RGRVVNVSSIAGI--VVVPSMAAYSITKYGV 98
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +3
Query: 429 GIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLASKLCLPVLKSSNHAHILNLSP 608
G+ L NNA + + Y M ++N G SK LP++K + ++N+S
Sbjct: 255 GLWALANNAGYGACAPIEWYPLSHYKRMADVNLWGVVDVSKTFLPLVKMA-RGRVVNISS 313
Query: 609 PLNMNPYWFSIHVAYTMAKYGM 674
F H Y + KYG+
Sbjct: 314 IYGFFSPIFGSH--YAITKYGV 333
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 369 DVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRG-TFLA 545
DV + +++QK I+ D+LVNNA + + +D MH N R F+A
Sbjct: 10 DVADIEKMQKLIESQ----ETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAPLFIA 65
Query: 546 SKLCLPVLKSSNHAHILNLS 605
+ ++ I+N+S
Sbjct: 66 QAVAKKMVAKGEGGAIVNVS 85
>SB_25087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 230 SNCFTDTTRCSSYK*RPTSQFTGICDKTH 144
S CF D RC SY P +F GIC+ +H
Sbjct: 68 SLCFHDD-RCISYNFGPIIEFKGICNLSH 95
>SB_46540| Best HMM Match : RVT_1 (HMM E-Value=4.8e-27)
Length = 751
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -2
Query: 306 CLEVLDGVLQFWRQ*QRW-HHLSPL*EQLLYRYHEMLQL*ITSYQPIYRYLRQDSYLRRN 130
CL LD V+ F R + H L + ++L Y YH ++ +P+ LR+++ +R
Sbjct: 267 CLAYLDDVIVFARTFEEMLHRLEAVLQRLRY-YHTFVERFSVIAEPLNELLREETGTKRQ 325
Query: 129 WIVT 118
++ T
Sbjct: 326 FVWT 329
>SB_15626| Best HMM Match : adh_short (HMM E-Value=3.8e-05)
Length = 426
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 423 FNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLASKLCLPVLKSSNHAHILNL 602
F G+ LVNNA + + + Y + ++N G +K LP+++ + H ++N+
Sbjct: 130 FAGLWGLVNNAGTLDVGPIEWLPLSSYKHVADVNLWGMIDVTKAFLPLVQQA-HGRVVNV 188
Query: 603 S 605
S
Sbjct: 189 S 189
>SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6)
Length = 1953
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 528 RGTF-LASKLCLPVLKSSNHAHILNLSPPLNMNPYWFSI 641
+GT+ LC ++K H LN+S P N Y FS+
Sbjct: 247 KGTYGREGALCATMIKFQKLMHFLNVSRPQNQKYYCFSV 285
>SB_11396| Best HMM Match : Ribosomal_S2 (HMM E-Value=0)
Length = 328
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 596 EPVTASEYESVLVLYSRCLHDGEVRHVDVCTP 691
+PVT + Y ++ V+ + C D +RHVDV P
Sbjct: 132 QPVTEASYVNIPVI-AFCNTDSPLRHVDVAIP 162
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +3
Query: 366 VDVREEKQIQKAIDDAVKKFNGIDILVNNASAISLTGTSQTDIKRYDLMHNINTRGTFLA 545
+DV I + +K+ G+DILVNNA + + + ++ + N G
Sbjct: 79 LDVTSNDSIHELTLHVQEKYGGLDILVNNAGILKKESSGTSYARKAEDCVKTNFFGMLDV 138
Query: 546 SKLCLPVLK 572
P+LK
Sbjct: 139 YNSMYPLLK 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,241,223
Number of Sequences: 59808
Number of extensions: 444149
Number of successful extensions: 1073
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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