Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N24
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   3.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   7.0  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   7.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   7.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.3  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 464 DTGSHTSKLSNKLWKDFADSFN 399
           DTGS  S +S ++W    ++ N
Sbjct: 105 DTGSEVSCISEEVWSKLIETGN 126


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPL 147


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPL 147


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPL 147


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 80  LLLTWWVEPRK*SSPHQVLML 142
           +++T++ +  + S PHQ+L L
Sbjct: 114 IMITFYRDEPRFSQPHQILTL 134


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 80  LLLTWWVEPRK*SSPHQVLML 142
           +++T++ +  + S PHQ+L L
Sbjct: 274 IMITFYRDEPRFSQPHQILTL 294


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 80  LLLTWWVEPRK*SSPHQVLML 142
           +++T++ +  + S PHQ+L L
Sbjct: 274 IMITFYRDEPRFSQPHQILTL 294


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPL 147


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPL 147


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 80  RSTPPLSTPSNSNATKSSGLTSPL 103


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPL 147


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPL 147


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 460 REAIPVSFPINCGKTLPTALTAPV 389
           R   P+S P N   T  + LT+P+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPL 147


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 428 LWKDFADSFNSASGNRDKVL 369
           +W    D FN  SG + ++L
Sbjct: 360 IWSIETDDFNGLSGTKYQIL 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,702
Number of Sequences: 336
Number of extensions: 3343
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)