Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N24
(545 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 175 3e-44
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 170 5e-43
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 164 5e-41
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 163 6e-41
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 146 1e-35
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 122 2e-28
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 107 6e-24
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286... 30 1.0
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 29 1.8
06_03_1407 - 29954374-29954738,29955939-29958558 29 2.4
10_02_0068 + 4888273-4889266,4889375-4889397 28 5.6
07_03_1666 + 28482262-28482385,28482475-28482992 27 7.4
08_02_1157 + 24765719-24766544,24766569-24766637,24767031-247671... 27 9.8
08_02_1156 - 24760332-24761530,24762757-24763648 27 9.8
02_03_0204 - 16369800-16371758,16372260-16372331 27 9.8
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868... 27 9.8
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 175 bits (425), Expect = 3e-44
Identities = 80/100 (80%), Positives = 89/100 (89%)
Frame = +1
Query: 1 PHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD 180
P IPWG GAEYVVES+GVFTTT+KASAHL GGAKKV+ISAPSADAPMFVVGVN ++YD
Sbjct: 218 PADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYD 277
Query: 181 PSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVHAT 300
P V+SNASCTTNCLAPLAKV+H+ F I+EGLMTTVHAT
Sbjct: 278 PKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHAT 317
Score = 109 bits (261), Expect = 2e-24
Identities = 54/73 (73%), Positives = 56/73 (76%)
Frame = +3
Query: 306 ATQKTVDGPSGKLWRDGRGAQQNFIPVSTGAVKAVGKVFPQFIGKLTGMASRVPVANVSV 485
ATQKTVDGPS K WR GRGA QN IP STGA KAVGKV P+ GKLTGMA RVP NVSV
Sbjct: 319 ATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV 378
Query: 486 VDLTVRLGKPVSY 524
VDLT R+ K SY
Sbjct: 379 VDLTCRIEKSASY 391
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 170 bits (414), Expect = 5e-43
Identities = 78/100 (78%), Positives = 88/100 (88%)
Frame = +1
Query: 1 PHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD 180
P IPWG GAEYVVES+GVFTTT+KASAHL GGA+KV+ISAPSADAPMFVVGVN + Y+
Sbjct: 159 PSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPSADAPMFVVGVNEKNYN 218
Query: 181 PSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVHAT 300
PS V+SNASCTTNCLAPLAK++H+ F I EGLMTTVHAT
Sbjct: 219 PSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHAT 258
Score = 109 bits (262), Expect = 1e-24
Identities = 55/74 (74%), Positives = 56/74 (75%)
Frame = +3
Query: 306 ATQKTVDGPSGKLWRDGRGAQQNFIPVSTGAVKAVGKVFPQFIGKLTGMASRVPVANVSV 485
ATQKTVDGPS K WR GRGA QN IP STGA KAVGKV P GKLTGMA RVP NVSV
Sbjct: 260 ATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPNVSV 319
Query: 486 VDLTVRLGKPVSYK 527
VDLT RL K SY+
Sbjct: 320 VDLTCRLEKSASYE 333
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 164 bits (398), Expect = 5e-41
Identities = 75/99 (75%), Positives = 84/99 (84%)
Frame = +1
Query: 1 PHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD 180
P IPWG+ GAE+VVESTGVFT DKA+AHL GGAKKV+ISAPS DAPMFVVGVN + Y
Sbjct: 132 PEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYK 191
Query: 181 PSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVHA 297
P ++SNASCTTNCLAPLAKVI+D F I+EGLMTTVHA
Sbjct: 192 PDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 230
Score = 108 bits (260), Expect = 2e-24
Identities = 54/75 (72%), Positives = 56/75 (74%)
Frame = +3
Query: 300 LLATQKTVDGPSGKLWRDGRGAQQNFIPVSTGAVKAVGKVFPQFIGKLTGMASRVPVANV 479
+ ATQKTVDGPS K WR GR A N IP STGA KAVGKV P GKLTGMA RVP +V
Sbjct: 231 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 290
Query: 480 SVVDLTVRLGKPVSY 524
SVVDLTVRL KP SY
Sbjct: 291 SVVDLTVRLEKPASY 305
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 163 bits (397), Expect = 6e-41
Identities = 76/99 (76%), Positives = 83/99 (83%)
Frame = +1
Query: 1 PHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD 180
P IPW +AGAEYVVESTGVFT +KA+AHL GGAKKV+ISAPS DAPMFV GVN + Y
Sbjct: 107 PDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYT 166
Query: 181 PSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVHA 297
++SNASCTTNCLAPLAKVIHDNF IIEGLMTTVHA
Sbjct: 167 SDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHA 205
Score = 105 bits (252), Expect = 2e-23
Identities = 52/82 (63%), Positives = 57/82 (69%)
Frame = +3
Query: 300 LLATQKTVDGPSGKLWRDGRGAQQNFIPVSTGAVKAVGKVFPQFIGKLTGMASRVPVANV 479
+ ATQKTVDGPS K WR GR A N IP STGA KAVGKV P GKLTGM+ RVP +V
Sbjct: 206 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDV 265
Query: 480 SVVDLTVRLGKPVSYKAFNRKV 545
SVVDLTVR+ K SY A +
Sbjct: 266 SVVDLTVRIEKAASYDAIKSAI 287
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 146 bits (353), Expect = 1e-35
Identities = 75/113 (66%), Positives = 82/113 (72%), Gaps = 14/113 (12%)
Frame = +1
Query: 1 PHAIPWGQAGAEYVVESTGVFTTTDKASAHLVG--------------GAKKVIISAPSAD 138
P IPW AGAEYVVESTGVFT DKA+AHL G GAKKV+ISAPS D
Sbjct: 89 PEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVDLFSIIFHMQGGAKKVVISAPSKD 148
Query: 139 APMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVHA 297
APMFVVGVN + Y ++SNASCTTNCLAPLAKVI+D F I+EGLMTTVHA
Sbjct: 149 APMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 201
Score = 107 bits (257), Expect = 6e-24
Identities = 54/75 (72%), Positives = 56/75 (74%)
Frame = +3
Query: 300 LLATQKTVDGPSGKLWRDGRGAQQNFIPVSTGAVKAVGKVFPQFIGKLTGMASRVPVANV 479
+ ATQKTVDGPS K WR GR A N IP STGA KAVGKV P GKLTGMA RVP +V
Sbjct: 202 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 261
Query: 480 SVVDLTVRLGKPVSY 524
SVVDLTVRL KP SY
Sbjct: 262 SVVDLTVRLEKPASY 276
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 122 bits (294), Expect = 2e-28
Identities = 57/109 (52%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 PHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPS-ADAPMFVVGVNLEAY 177
P +PWG+ G + V+E TGVF D A H+ GAKKV+I+AP D P +VVGVN + Y
Sbjct: 148 PSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQY 207
Query: 178 DPSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVHATYLPPRRLL 324
P +ISNASCTTNCLAP K++ F II+G MTT H +Y +RLL
Sbjct: 208 SPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTTTH-SYTGDQRLL 255
Score = 63.3 bits (147), Expect = 1e-10
Identities = 35/76 (46%), Positives = 43/76 (56%)
Frame = +3
Query: 312 QKTVDGPSGKLWRDGRGAQQNFIPVSTGAVKAVGKVFPQFIGKLTGMASRVPVANVSVVD 491
Q+ +D L R R A N +P STGA KAV V P GKL G+A RVP NVSVVD
Sbjct: 252 QRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVD 310
Query: 492 LTVRLGKPVSYKAFNR 539
L V++ K + N+
Sbjct: 311 LVVQVSKKTLAEEVNQ 326
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 107 bits (257), Expect = 6e-24
Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Frame = +1
Query: 1 PHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIISAPS--ADAPMFVVGVNLEA 174
P +PW + G + V+E TGVF A H+ GAKKVII+AP+ AD P +V+GVN
Sbjct: 158 PLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGD 217
Query: 175 YDPSY-KVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVHATYLPPRRLL 324
Y +ISNASCTTNCLAP K++ + F I++G MTT H +Y +RLL
Sbjct: 218 YSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTH-SYTGDQRLL 267
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = +3
Query: 312 QKTVDGPSGKLWRDGRGAQQNFIPVSTGAVKAVGKVFPQFIGKLTGMASRVPVANVSVVD 491
Q+ +D L R R A N +P STGA KAV V PQ GKL G+A RVP NVSVVD
Sbjct: 264 QRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVD 322
Query: 492 LTVRLGK 512
L + K
Sbjct: 323 LVINTVK 329
>01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,
2863431-2863516,2863648-2866272
Length = 1139
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2
Query: 445 VSFPINCGKTLPTALTAPVETGIKFC*APRPSRHSFPEGPST 320
VSFP + G+ +PT L +P KF P S FP G +T
Sbjct: 951 VSFPTHQGENVPTLLFSPYSPATKFLFLPGVS-GGFPGGEAT 991
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 173 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPV 51
+ L TT G + +GA + F++ P+K SVVVN V
Sbjct: 327 SEELIDTTGAGDAFIGAVLYAFVSGPSKFCSVKSVVVNLAV 367
>06_03_1407 - 29954374-29954738,29955939-29958558
Length = 994
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +1
Query: 106 KKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMT 285
K ++ +PSA AP + + A P++ S +C ++V+ N +
Sbjct: 30 KAALVPSPSATAPPPLADWDPAATSPAHCTFSGVTCDGR-----SRVVAINLTALP---- 80
Query: 286 TVHATYLPPRRLLMDLLEN 342
+H+ YLPP L+D L N
Sbjct: 81 -LHSGYLPPEIALLDSLAN 98
>10_02_0068 + 4888273-4889266,4889375-4889397
Length = 338
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 404 SCRQSLSTIYWKAYWYGFPCPCRKCFSGGPYCP 502
+CR S S G+ C C++ + G PY P
Sbjct: 295 ACRSSNSLCVNTTNGQGYVCKCQEGYEGNPYLP 327
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 164 LTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHG 12
+T + MG+ G+ + + PP + S+ TT AP PHG
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHG 131
>08_02_1157 +
24765719-24766544,24766569-24766637,24767031-24767180,
24767296-24768503
Length = 750
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 452 GFPCPCRKCFSGGPYCPS 505
G+ C CR + G PY P+
Sbjct: 278 GYACKCRSGYDGNPYMPN 295
>08_02_1156 - 24760332-24761530,24762757-24763648
Length = 696
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 404 SCRQSLSTIY-WKAYWY-GFPCPCRKCFSGGPYCPS 505
+CR S S + +Y Y G+ C C + G PY P+
Sbjct: 259 ACRSSNSYCQNYTSYVYNGYQCRCNAGYQGNPYIPN 294
>02_03_0204 - 16369800-16371758,16372260-16372331
Length = 676
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 425 WKDFADSFNSASGNRDKVLLSPTAIAPQFSRRS 327
WK D+F S S N++ + + T + P ++ S
Sbjct: 73 WKKLNDNFTSGSVNKENLEMISTTLEPSYNNLS 105
>01_06_0115 +
26585481-26586401,26586501-26586556,26586747-26586876,
26587396-26587506,26587606-26587674,26588125-26588198,
26588446-26588581,26588702-26588795,26588901-26589000,
26589100-26589224,26589597-26589634,26589662-26589742,
26589868-26589972,26590102-26590166,26590371-26590572,
26591073-26591159,26591238-26591294,26591369-26591458,
26591572-26591658,26592204-26592278,26592363-26592463,
26592565-26592655
Length = 964
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 202 NASCTTNCLAPLAKVIHDNFEII 270
N SCT NC A + V HD I+
Sbjct: 899 NHSCTPNCYARIMSVGHDESRIV 921
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,416,683
Number of Sequences: 37544
Number of extensions: 392706
Number of successful extensions: 1137
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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