Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N24
(545 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 1.5
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 23 2.7
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 2.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 6.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.2
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 6.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 6.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.2
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 8.2
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 8.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.2
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 8.2
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.4 bits (48), Expect = 1.5
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 171 FQVDTNY--KHGSISTWCGDDYFLGSTHQVSRSFISGCEHTG*FNNVFSTSL 22
FQV+ ++ K +W GD + + +VSR+ +G T V S S+
Sbjct: 691 FQVNQSHGIKRSGSHSWEGDSFKVSKHEEVSRTSTAGQFPTNVATTVTSMSI 742
Score = 23.0 bits (47), Expect = 2.0
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +3
Query: 366 QQN---FIPVSTGAVKAVGKVFPQFIG-KLTGMASRVPVANVSVVDLTVRLGKPVSYKAF 533
QQN F+PVS + G ++P IG TGM + P ++ +P K
Sbjct: 824 QQNPYMFLPVSYMSTTMAGVIYPPVIGTPSTGMMYK-PFLIPEQTSISHENNQPTMNKCS 882
Query: 534 NRK 542
+RK
Sbjct: 883 DRK 885
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 466 GTREAIPVSFPINCGKTLPTALTAPVETGIK 374
G + I +FP CGKT A+ P G K
Sbjct: 9 GKKRYITAAFPSACGKT-NLAMMKPTLPGYK 38
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 431 KLWKDFADSFNSASGNRDKVLL 366
K W+DF D++ + RD+++L
Sbjct: 276 KEWRDFVDNY-AEENKRDEIVL 296
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.8 bits (44), Expect = 4.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 434 NKLWKDFADSFNSASGNRDKVLLSPTAIAP 345
+K+WK FN+A GN + S I P
Sbjct: 106 DKVWKPDIVLFNNADGNYEVRYKSNVLIYP 135
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 117 EQIPVPVPIYCGNFPP 132
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 117 EQIPVPVPIYCGNFPP 132
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 117 EQIPVPVPIYCGNFPP 132
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 117 EQIPVPVPIYCGNFPP 132
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 117 EQIPVPVPIYCGNFPP 132
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 117 EQIPVPVPIYCGNFPP 132
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 121 EQIPVPVPIYCGNFPP 136
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 117 EQIPVPVPIYCGNFPP 132
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 114 EQIPVPVPIYCGNFPP 129
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 342 EQIPVPVPIYCGNFPP 357
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV PI CG P
Sbjct: 355 EQIPVPVPIYCGNFPP 370
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +3
Query: 468 VANVSVVDLTVRLGKPVSYKAFN 536
+ +V+++D R+ PVS+ FN
Sbjct: 458 IKDVNIIDKYSRIIFPVSFMLFN 480
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IP+ PI CG P
Sbjct: 115 EQIPIPVPIYCGNFPP 130
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IP+ PI CG P
Sbjct: 115 EQIPIPVPIYCGNFPP 130
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IP+ PI CG P
Sbjct: 115 EQIPIPVPIYCGNFPP 130
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -1
Query: 437 SNKLWKDFADSFNSASGNRDKVLLSPTAI 351
S+ +W+ +N+A GN + L++ +
Sbjct: 107 SDHIWRPDIVLYNNADGNYEVTLMTKATV 135
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2
Query: 457 EAIPVSFPINCGKTLP 410
E IPV P+ CG P
Sbjct: 344 EQIPVPVPVYCGNFPP 359
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,333
Number of Sequences: 438
Number of extensions: 3360
Number of successful extensions: 41
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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