Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N22
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    25   0.28 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.28 
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   7.9  

>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 224 RKPEQFIAILNSFSPKRYFMRCRVLLRQY 138
           +KP Q +A+L    PK YF     L R Y
Sbjct: 43  KKPVQILALLQEIIPKSYFGTTTNLKRFY 71


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 224 RKPEQFIAILNSFSPKRYFMRCRVLLRQY 138
           +KP Q +A+L    PK YF     L R Y
Sbjct: 43  KKPVQILALLQEIIPKSYFGTTTNLKRFY 71


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -1

Query: 485 PTRLRELLGSLRLHRHKVFWPN 420
           P     ++G+ ++HR + ++PN
Sbjct: 83  PAGCTVVIGTFKVHRLEEYYPN 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,850
Number of Sequences: 336
Number of extensions: 2862
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)