Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N22
(488 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_57395| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_47175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_30549| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-08) 28 3.6
SB_18197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_48276| Best HMM Match : RVT_1 (HMM E-Value=0.57) 27 6.3
SB_47315| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 27 6.3
SB_26320| Best HMM Match : PGM_PMM_IV (HMM E-Value=10) 27 6.3
SB_18103| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_434| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 8.3
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 163 RIKYLFGENEFKMAINCSGFRKKHYDVKSRNRVVMISAHNCDSGQMFSDV 312
R Y F +NC GFR H+ + M S CD + FSD+
Sbjct: 72 RYSYSKRATSFDYEVNCGGFRNSHFSCTTEEAKRMFSRSFCD--EDFSDL 119
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 283 CDSGQMFSDVRVVPQYLNVYRSKWAYENNE 372
CD QMF V P++ N R W +ENN+
Sbjct: 605 CDVEQMFHSFHVNPEHRNFLRFLW-FENND 633
>SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1453
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 274 AHNCDSGQMFSDVRVVPQYLNVYRSKWAYENNEFVLTRFPY 396
A CD MF VRV P+ ++ R W +++N+F L Y
Sbjct: 619 AFTCDIEGMFHQVRVDPENRDLLRFIW-WKDNDFSLEPIDY 658
>SB_57395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 58 WSDGRPIENYFLDAANELIRADRRAKEYCRSNTRHRIKYL-FGENEFKMAINCSGFRKKH 234
W G + + A E A R + S T+HR+K L F F + N GF K
Sbjct: 96 WMGGYASAYFLVAIAIERYYAVTRPHRFGASITKHRLKLLVFLCWLFALCWNAIGFAVKR 155
Query: 235 YDVKS 249
YD K+
Sbjct: 156 YDDKT 160
>SB_47175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1088
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 283 CDSGQMFSDVRVVPQYLNVYRSKWAYENN 369
CD QMF V P++ N R W +ENN
Sbjct: 669 CDVEQMFHSFHVNPEHRNFLRFLW-FENN 696
>SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 55 HWSDGRPIENYFLDAANELIRAD 123
+WSD +PI +YFL ++ EL R +
Sbjct: 409 NWSDTQPIVSYFLRSSRELKRLE 431
>SB_30549| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-08)
Length = 290
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 58 WSDGRPIENYFLDAANELIRADRRAKEYCRSNTRHRIKYLF-GENEFKMAINCSGFRKKH 234
W G + + A E A R Y S + R+K + G + + NCSGF+ K
Sbjct: 48 WVAGYASAAFLIAIAIERYYATTRPHSYGSSLIKRRLKVVVVGCWVWALVWNCSGFKTKF 107
Query: 235 YDVK 246
Y+ K
Sbjct: 108 YNEK 111
>SB_18197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 372 FVVLVCPFRTVNVEILRYDSNIGEHLP*IAVVSADHHHP 256
F+ V N+ + SN+G+HLP V AD H P
Sbjct: 1031 FLAAVADHEAANITVSWISSNVGQHLP---VRLADLHEP 1066
>SB_48276| Best HMM Match : RVT_1 (HMM E-Value=0.57)
Length = 427
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 283 CDSGQMFSDVRVVPQYLNVYRSKWAYENN 369
CD QMF V P + + R W ENN
Sbjct: 217 CDVEQMFHSFHVEPSHRDFLRFLWFEENN 245
>SB_47315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 344 VRNGHTRTTNLC*PGSPTYLGKRYGSWA 427
+RN HT +N C PG P L + W+
Sbjct: 56 LRNKHTNPSNSCSPGDPLVLERPPPRWS 83
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 283 CDSGQMFSDVRVVPQYLNVYRSKWAYENN 369
CD QMF V P + + R W ENN
Sbjct: 1001 CDVEQMFHSFHVEPSHRDFLRFLWFEENN 1029
>SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1584
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 283 CDSGQMFSDVRVVPQYLNVYRSKWAYENN 369
CD QMF V P + + R W ENN
Sbjct: 670 CDVEQMFHSFHVEPSHRDFLRFLWFEENN 698
>SB_26320| Best HMM Match : PGM_PMM_IV (HMM E-Value=10)
Length = 237
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 283 CDSGQMFSDVRVVPQYLNVYRSKWAYENN 369
CD QMF V P + + R W ENN
Sbjct: 118 CDVEQMFHSFHVEPSHRDFLRFLWFKENN 146
>SB_18103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 283 CDSGQMFSDVRVVPQYLNVYRSKWAYENN 369
CD QMF V P + + R W ENN
Sbjct: 178 CDVEQMFHSFHVEPSHRDFLRFLWFEENN 206
>SB_434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 87 IVLNRSTVTPMAWRWSAC 34
+VL RS V WRW AC
Sbjct: 240 VVLRRSPVETAGWRWLAC 257
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 199 MAINCSGFRKKHYDVKSRNRVVMISAHNCDSGQMFSDVRVV 321
+ I C+ + K + + RNR MIS H C S ++VRV+
Sbjct: 17 LPIQCTSYSKFRFQIV-RNRC-MISVHACPSFTAGTNVRVI 55
>SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 283 CDSGQMFSDVRVVPQYLNVYRSKWAYENN 369
CD QMF V P + + R W ENN
Sbjct: 372 CDVEQMFHSFHVDPSHRDFLRFLWFEENN 400
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 259 PDSWTS-HRNVSSGNRNSLSPF*IHSHRR 176
PD W+S + + S R SLSP HS R+
Sbjct: 119 PDGWSSTEQELESNTRKSLSPDSHHSRRK 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,337,826
Number of Sequences: 59808
Number of extensions: 381833
Number of successful extensions: 999
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1038380485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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