Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N22
         (488 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC072409-1|AAH72409.1|  833|Homo sapiens SMEK1 protein protein.        29   8.6  
BC038932-1|AAH38932.1|  594|Homo sapiens SMEK1 protein protein.        29   8.6  
AK024297-1|BAB14877.1|  696|Homo sapiens protein ( Homo sapiens ...    29   8.6  
AB095930-1|BAC23106.1|  920|Homo sapiens KIAA2010 protein protein.     29   8.6  

>BC072409-1|AAH72409.1|  833|Homo sapiens SMEK1 protein protein.
          Length = 833

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 275 LTTAIQGRCSPMFESYRSISTFTVRNGHTRTTNLC*PGSP 394
           L T + GR SP F+   S  T T     + TTNL  PGSP
Sbjct: 732 LKTNLSGRQSPSFKLSLSSGTKTNLTSQSSTTNL--PGSP 769


>BC038932-1|AAH38932.1|  594|Homo sapiens SMEK1 protein protein.
          Length = 594

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 275 LTTAIQGRCSPMFESYRSISTFTVRNGHTRTTNLC*PGSP 394
           L T + GR SP F+   S  T T     + TTNL  PGSP
Sbjct: 493 LKTNLSGRQSPSFKLSLSSGTKTNLTSQSSTTNL--PGSP 530


>AK024297-1|BAB14877.1|  696|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14235 fis, clone NT2RP4000167. ).
          Length = 696

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 275 LTTAIQGRCSPMFESYRSISTFTVRNGHTRTTNLC*PGSP 394
           L T + GR SP F+   S  T T     + TTNL  PGSP
Sbjct: 595 LKTNLSGRQSPSFKLSLSSGTKTNLTSQSSTTNL--PGSP 632


>AB095930-1|BAC23106.1|  920|Homo sapiens KIAA2010 protein protein.
          Length = 920

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +2

Query: 275 LTTAIQGRCSPMFESYRSISTFTVRNGHTRTTNLC*PGSP 394
           L T + GR SP F+   S  T T     + TTNL  PGSP
Sbjct: 819 LKTNLSGRQSPSFKLSLSSGTKTNLTSQSSTTNL--PGSP 856


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,329,041
Number of Sequences: 237096
Number of extensions: 1681173
Number of successful extensions: 3982
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3982
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)