Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N22
         (488 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68748-5|CAA92956.2|  446|Caenorhabditis elegans Hypothetical pr...    30   1.0  
U64844-11|AAB18311.1|  482|Caenorhabditis elegans Hypothetical p...    29   2.4  
AF024494-8|ABQ13073.1|  256|Caenorhabditis elegans Hypothetical ...    28   4.2  
Z68105-2|CAA92118.1|  270|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical ...    27   5.5  

>Z68748-5|CAA92956.2|  446|Caenorhabditis elegans Hypothetical
           protein F13H10.5 protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = -3

Query: 264 HHPIPGLHIVMFLPETGTVYRHFEF----ILTEEVLYAMP 157
           H+PIP +H+    P++G +  H+ F    I+ + VL A P
Sbjct: 285 HNPIPNVHVYYTTPKSGNLPDHYHFKKSDIVADLVLLADP 324


>U64844-11|AAB18311.1|  482|Caenorhabditis elegans Hypothetical
           protein T22F3.8 protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 159 PSVTTAVFLRTSVCSDKLICGI*EIVLNRSTVTPMAWRWSACLH 28
           P   TA+F+    C + +   I  +      V+ + W+WS  LH
Sbjct: 177 PLAETAIFVAVLTCFNAIASMITNMATGLICVSSLGWKWSYYLH 220


>AF024494-8|ABQ13073.1|  256|Caenorhabditis elegans Hypothetical
           protein C38C3.3 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 272 ALTTAIQGRCSPMFESYRSISTFTVRNGHTRTTN 373
           A T  +Q RC P  +SY+ I  F  R+   +  N
Sbjct: 97  AATEVVQDRCHPQPKSYQKIRIFNHRDDEVKIDN 130


>Z68105-2|CAA92118.1|  270|Caenorhabditis elegans Hypothetical
           protein F13E6.3 protein.
          Length = 270

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 395 TYLGKRYGSWAKRLCDDVNEVILTVPE 475
           TY+ +R  SW K L +   EV+L+ PE
Sbjct: 139 TYISERISSWRKILAES-REVVLSYPE 164


>AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical
           protein BE0003N10.3 protein.
          Length = 1145

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 244 KSRNRVVMISAHNCDSGQMFSDVRVVPQYLNVYRSKWA 357
           K  N   +  A  CD   +F D++V+P + N + +KWA
Sbjct: 118 KEMNLEWVSKASICDKLPIFEDLKVIP-FNNQHETKWA 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,625,562
Number of Sequences: 27780
Number of extensions: 272504
Number of successful extensions: 700
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)