Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N22
         (488 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.76 
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    24   1.00 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   1.7  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    22   4.0  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   7.0  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    21   7.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 233  CFFRKPEQFIA 201
            C FRKPE F+A
Sbjct: 1615 CLFRKPEHFVA 1625


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 405 PKYVGEPGQHKFVVLVCPFRTVNVEILRYDSNI 307
           PK++G+P    F V V    ++N E + Y ++I
Sbjct: 23  PKFLGQPTIVYFHVTVLSIDSINEESMTYVADI 55


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 470 ELLGSLRLHRHKVFWPNCHTSYPN 399
           ++LG +   RHK ++P C   YP+
Sbjct: 202 DILG-VPAERHKKYYPCCDEPYPD 224


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 215 EQFIAILNSFSPKRYFMRCRVL 150
           EQ +A+ N F   RY   C  L
Sbjct: 18  EQLVALENKFKTTRYLSVCERL 39


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 307 DVRVVPQYLNVYRSKWAYENN 369
           D+  VP YLN Y+  +  E +
Sbjct: 202 DIINVPAYLNTYKGDFPTETD 222


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 392 PTYLGKRYGSWAKRLCDD 445
           P +LGKRY  ++    DD
Sbjct: 2   PDFLGKRYKLYSSENFDD 19


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 373 FVLTRFPYVFG 405
           ++ + FPYVFG
Sbjct: 113 YIWSHFPYVFG 123


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 485 PTRLRELLGSLRLHRHKVFWPN 420
           P     ++G+ +LHR    +PN
Sbjct: 435 PAGCTVVIGTFKLHRQPHIYPN 456


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 268  SSPPDSWTSHRNVSSGNR 215
            +SPP + TS ++VSS  R
Sbjct: 1752 ASPPPAATSMKSVSSRRR 1769


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 268  SSPPDSWTSHRNVSSGNR 215
            +SPP + TS ++VSS  R
Sbjct: 1748 ASPPPAATSMKSVSSRRR 1765


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,931
Number of Sequences: 438
Number of extensions: 3265
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)