Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N20
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          28   0.050
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   0.61 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.4  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   4.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   5.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   5.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   9.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   9.9  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    20   9.9  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    20   9.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 0.050
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 137 NQGIQPYNPMVFLTW*EISRHGDSTCPASCSNVRDTDP 250
           N GIQPY+ +++ TW  + R     C  S  N +D DP
Sbjct: 464 NMGIQPYDSLLWHTWMPVMR----IC-VSAWNPKDCDP 496


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 0.61
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +3

Query: 84  SIPIVESGIDVTE---KLYFRIKESNPIIRWYFSLGEKSLATGIQLALPA-----VQMFE 239
           S+ I+++  D+T    +    +K++NP ++  FSLG  +  T    A+ A       M +
Sbjct: 65  SLLILDNATDITNGGLQKVAALKKTNPALKALFSLGGYAAGTATFTAVAADATKRATMAK 124

Query: 240 TPIHQFDKFLCKSLDV 287
           + +  F+ +    LDV
Sbjct: 125 SALEFFETYNFDGLDV 140


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 372 SPPDGERIVSFPNTSSVVVS*WK 304
           SP D +R+  + NT SV+   WK
Sbjct: 153 SPDDHDRLRMYINTESVLDGDWK 175


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 258 RTGGSVSRTFEQLAGQVESPWREISHQVR 172
           R GG V+  ++    +V   W+ I H  R
Sbjct: 212 RAGGLVNSLYQNATRKVCGVWKRIPHDYR 240


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 325 CGGKLMEGTLFSTTSSDLHKNLSNWW 248
           C  K  +G    T    L+KN  +WW
Sbjct: 77  CTDKQKQGA--KTVIQHLYKNKQDWW 100


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 308  GRHSLLHNIERLA*K 264
            GR   +HN+ER A K
Sbjct: 1413 GRRKTIHNLERAAQK 1427


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 308  GRHSLLHNIERLA*K 264
            GR   +HN+ER A K
Sbjct: 1413 GRRKTIHNLERAAQK 1427


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 308  GRHSLLHNIERLA*K 264
            GR   +HN+ER A K
Sbjct: 1413 GRRKTIHNLERAAQK 1427


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 308  GRHSLLHNIERLA*K 264
            GR   +HN+ER A K
Sbjct: 1413 GRRKTIHNLERAAQK 1427


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 170 IPSDYRVGFLDSEVQFFGDVNP 105
           +P D R+ +  +E+  F +V+P
Sbjct: 51  VPPDERITYSWTEINAFANVSP 72


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 170 IPSDYRVGFLDSEVQFFGDVNP 105
           +P D R+ +  +E+  F +V+P
Sbjct: 51  VPPDERITYSWTEINAFANVSP 72


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 217 CQLFKCSRHRSTSSISFYASRSMLWRRECL 306
           C+L KC     + S S Y  RS  ++  CL
Sbjct: 61  CRLRKCLLVGMSKSGSRYGRRSNWFKIHCL 90


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 134 QNQGIQPYNPMVFLTW 181
           QNQ  +P  P   LTW
Sbjct: 583 QNQWCKPCRPREQLTW 598


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 134 QNQGIQPYNPMVFLTW 181
           QNQ  +P  P   LTW
Sbjct: 475 QNQWCKPCRPREQLTW 490


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 322 GGKLMEGTLFSTTSSDLHKN 263
           G  + EGT+      DLH+N
Sbjct: 77  GNTIPEGTVLHIHIFDLHRN 96


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 322 GGKLMEGTLFSTTSSDLHKN 263
           G KL +GT+      DLH N
Sbjct: 78  GYKLRKGTILQLHIYDLHYN 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,362
Number of Sequences: 336
Number of extensions: 2518
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)