Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N20
         (467 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53501| Best HMM Match : YTV (HMM E-Value=7.8)                       33   0.089
SB_10655| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.36 
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)                      29   1.9  
SB_32538| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.4  
SB_52524| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.4  
SB_44425| Best HMM Match : SAM_1 (HMM E-Value=0.00024)                 27   5.9  
SB_52674| Best HMM Match : Peptidase_A17 (HMM E-Value=3.9e-07)         27   7.7  
SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  

>SB_53501| Best HMM Match : YTV (HMM E-Value=7.8)
          Length = 128

 Score = 33.5 bits (73), Expect = 0.089
 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
 Frame = +3

Query: 72  SRVASIPIVESGIDVTEKLYFRIKESNPIIRWYFSLGEKSLA---------------TGI 206
           SR+  +P+V + ++   ++Y  +KE N + +     GE +L+               T  
Sbjct: 28  SRLYELPVVMAAMEQLSQIYGNVKERNAVTKKVCEAGESTLSVATAASKPLIQKATNTAF 87

Query: 207 QLALPAVQMFETPIHQFDKFLCKSLDVVEKRVPSINLPP 323
            LA P +     P+   D    ++L  VE++ P I   P
Sbjct: 88  TLAKPVIGEVNDPVSTIDNVASETLAKVEEKFPVITKTP 126


>SB_10655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 774

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +1

Query: 145 NPTL*SDGISHLVRNLSPRGFNLPCQLFKCSRHRSTSSISFYASRSMLWRRECL--PSTY 318
           NPTL  +  SH++    P G  LP ++   S   S  S+S    R  LW  E L  P  +
Sbjct: 250 NPTLMFNKDSHMILGGKPDGVTLPPEIDTPSYVGSIDSLSINHYRVGLWNAENLIRPQMF 309

Query: 319 HHRRCIRK 342
           + R   R+
Sbjct: 310 YDRLAFRE 317


>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
          Length = 2411

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 3/115 (2%)
 Frame = +1

Query: 34  RRKARGCRGS--KLCQGSLPYPS*NQGLTSPKNCTSESRNPTL*SDGISHLVRNLSPRGF 207
           R K   C  S   L  G+    S N     P NC S+  +P    DG+++  +NL     
Sbjct: 550 RTKCNACTLSTCNLVYGTCSASSANASCICPTNCPSDW-DPVCGDDGVTY--QNLCHL-L 605

Query: 208 NLPCQLFKCSRHRSTSSIS-FYASRSMLWRRECLPSTYHHRRCIRKRDNTFSVGR 369
              C   +  R           AS    ++ ECL   Y    C +KRD TF++G+
Sbjct: 606 REACTSGRIIRRLYRGVCDPVCASDGRTYQNECLAKKY---ACEKKRDLTFTLGK 657


>SB_32538| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 136

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 112 SIPDSTMGMEATLDTTSSRGILAPFV 35
           S+PD+T   + T++ T+S  +L P V
Sbjct: 102 SLPDNTQACDVTINATTSASVLGPHV 127


>SB_52524| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 481

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 271 ASRSMLWRRECLPSTYHHRRCIRKRDNTFSV 363
           A R + WRR+ LP   H R   R+R N++ +
Sbjct: 405 ARRFVSWRRQRLPPFVHRRGKKRRRGNSYRI 435


>SB_44425| Best HMM Match : SAM_1 (HMM E-Value=0.00024)
          Length = 414

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +1

Query: 181 VRNLSPRGFNLPCQLFKCSRHRSTSSISFYASRSMLWRRECLPSTYHHR 327
           V+++  +   +PC++ KC+ +    S +  AS     +   LP+ + H+
Sbjct: 278 VKSMEGQKRKIPCEVVKCTFNGEEQSFTQMASSGAKPKANSLPARFRHK 326


>SB_52674| Best HMM Match : Peptidase_A17 (HMM E-Value=3.9e-07)
          Length = 729

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
 Frame = +3

Query: 21  IIMAKTKGA-----RMPRLEVVSRVASIPIVESGIDVTEKLY 131
           I+M+K+KGA      +PRLE+++ V +  +++  ID    LY
Sbjct: 338 ILMSKSKGAPTKVVSLPRLEILAAVVNCRLLKFVIDSLSVLY 379


>SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2484

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +1

Query: 103  QGLTSPKNCTSESRNPTL*SDGISHLVRNLSPRGFNLPCQLFKCSRH 243
            +G  +P + + +S N T  +  I+HL++N+S  G NL   +   SRH
Sbjct: 2205 RGAVTPASMSLKS-NST--NSSINHLLKNISNDGLNLRRPILFLSRH 2248


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,931,819
Number of Sequences: 59808
Number of extensions: 329589
Number of successful extensions: 905
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 969807871
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)