Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N20
(467 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 31 0.41
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 31 0.41
Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical pr... 28 2.9
AF024494-4|AAQ62459.1| 253|Caenorhabditis elegans Hypothetical ... 28 2.9
Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical pr... 28 3.8
U49956-8|AAA93436.1| 765|Caenorhabditis elegans Hypothetical pr... 27 6.7
U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical pr... 27 6.7
U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical pr... 27 6.7
U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical pr... 27 6.7
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 27 8.9
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 31.1 bits (67), Expect = 0.41
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 257 ELVDRCLEHLNSWQGKLNPRGER 189
ELVDRCL+H + W G+ P ++
Sbjct: 181 ELVDRCLDHCHEWLGQNVPHSQQ 203
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 31.1 bits (67), Expect = 0.41
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 257 ELVDRCLEHLNSWQGKLNPRGER 189
ELVDRCL+H + W G+ P ++
Sbjct: 181 ELVDRCLDHCHEWLGQNVPHSQQ 203
>Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical
protein Y69H2.8 protein.
Length = 348
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 239 LEHLNSWQGKLNPRGERFLTK*EIPSDYRVGFL 141
+EH NSW K N E F K I S++ +GF+
Sbjct: 160 IEHANSWALKFN-FYENFTEKTSILSEFAIGFM 191
>AF024494-4|AAQ62459.1| 253|Caenorhabditis elegans Hypothetical
protein C38C3.4b protein.
Length = 253
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 159 IRWYFSLGEKSLATGIQLALPAVQMFETPIHQ 254
+R+ F G SL+TG++LAL A+Q ++ +HQ
Sbjct: 122 LRFLFEDGRFSLSTGLRLALFAIQPIQS-LHQ 152
>Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical
protein F56F3.1 protein.
Length = 761
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = -3
Query: 378 SQSPPDGERIVSFPNTSSVVVS*WKALSSPQHRATCIKTYRTGGSVSRTFEQLAGQVESP 199
SQSPP+ + S + S ++ K L Q+ A ++ +G +R + GQ + P
Sbjct: 576 SQSPPESNQETSDAHNQSDAMNQLKKLHMQQNYANMVQAMNSGVGWARGNGVVNGQQQHP 635
Query: 198 WREISHQVR 172
+++ V+
Sbjct: 636 QQQLPPNVQ 644
>U49956-8|AAA93436.1| 765|Caenorhabditis elegans Hypothetical
protein M03A1.6a protein.
Length = 765
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 93 IVESGIDVTEKLYFRIKESNPIIRWYFSLGEKSLATGIQLALPAVQMFETPIHQFDKFLC 272
IV + + Y K +NP + S+ SL G + + + +P+ FDK++
Sbjct: 382 IVRGVVSQLNRTYKLFKANNPQFNGHVSVFGHSL--GSVICYDVLTQY-SPLMLFDKYVT 438
Query: 273 KSLDVVEKR 299
KS+D KR
Sbjct: 439 KSIDEYLKR 447
>U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical
protein M03A1.6b protein.
Length = 753
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 93 IVESGIDVTEKLYFRIKESNPIIRWYFSLGEKSLATGIQLALPAVQMFETPIHQFDKFLC 272
IV + + Y K +NP + S+ SL G + + + +P+ FDK++
Sbjct: 370 IVRGVVSQLNRTYKLFKANNPQFNGHVSVFGHSL--GSVICYDVLTQY-SPLMLFDKYVT 426
Query: 273 KSLDVVEKR 299
KS+D KR
Sbjct: 427 KSIDEYLKR 435
>U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6d protein.
Length = 762
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 93 IVESGIDVTEKLYFRIKESNPIIRWYFSLGEKSLATGIQLALPAVQMFETPIHQFDKFLC 272
IV + + Y K +NP + S+ SL G + + + +P+ FDK++
Sbjct: 379 IVRGVVSQLNRTYKLFKANNPQFNGHVSVFGHSL--GSVICYDVLTQY-SPLMLFDKYVT 435
Query: 273 KSLDVVEKR 299
KS+D KR
Sbjct: 436 KSIDEYLKR 444
>U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6c protein.
Length = 762
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 93 IVESGIDVTEKLYFRIKESNPIIRWYFSLGEKSLATGIQLALPAVQMFETPIHQFDKFLC 272
IV + + Y K +NP + S+ SL G + + + +P+ FDK++
Sbjct: 379 IVRGVVSQLNRTYKLFKANNPQFNGHVSVFGHSL--GSVICYDVLTQY-SPLMLFDKYVT 435
Query: 273 KSLDVVEKR 299
KS+D KR
Sbjct: 436 KSIDEYLKR 444
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +1
Query: 235 SRHRSTSSISFYASRSMLWRRECLPSTYHHRRCIRKRDNTFSVGRTL*NSSVPPCW 402
S+ R+ ++ + S R L C RK T V + NSS PP W
Sbjct: 820 SQKRAENNYVHHLSNDCSHRSHHLTQELSDNNCARKEAETLCVPKDHPNSSGPPQW 875
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,884,920
Number of Sequences: 27780
Number of extensions: 240845
Number of successful extensions: 624
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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