Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N19
(505 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.34
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 0.78
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 24 0.78
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 1.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 1.8
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 1.8
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 1.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.4
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 22 3.2
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 7.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.3
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 7.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 9.6
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 9.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.6
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 9.6
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 0.34
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 277 YYTPERNPKEADYTAPIYAPQN 342
Y+ E++PK+ T P APQN
Sbjct: 302 YFRAEKDPKKMPCTQPPSAPQN 323
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 0.78
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 79 TTPVDDKESEHREGFTALV 135
T P+DD S+ EGF A++
Sbjct: 150 TNPLDDSISQANEGFCAVI 168
Score = 21.0 bits (42), Expect = 7.3
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Frame = +1
Query: 100 ESEHREGFTALVREMKQALNVKPNMQLVISVLPNV-NSSIYFDV--PSIINLV-----DI 255
E +H+ F + + + P ++ SV N++ Y P ++ D+
Sbjct: 279 EQQHKAMFLVVTAQPVHSAYKAPEETIISSVFTTRHNATCYLSHVDPDVVQYFGYLPQDM 338
Query: 256 VNIQAFDYYTPERNP 300
V FD+Y PE P
Sbjct: 339 VGRSLFDFYHPEDLP 353
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 24.2 bits (50), Expect = 0.78
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 79 TTPVDDKESEHREGFTALV 135
T P+DD S+ EGF A++
Sbjct: 145 TNPLDDSISQANEGFCAVI 163
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 373 INYWIQNGAPTHKLVLGISTTGRTWKLDSDSGNSGVPPI 489
+++WI + A + ++ LGI TT T S S +P I
Sbjct: 261 VSFWINHEATSARVALGI-TTVLTMTTISTGVRSSLPRI 298
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 373 INYWIQNGAPTHKLVLGISTTGRTWKLDSDSGNSGVPPI 489
+++W+ A ++ LG+ TT T S N+ +P I
Sbjct: 240 VSFWLNRNATPARVALGV-TTVLTMTTLMSSTNAALPKI 277
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 373 INYWIQNGAPTHKLVLGISTTGRTWKLDSDSGNSGVPPI 489
+++W+ A ++ LG+ TT T S N+ +P I
Sbjct: 240 VSFWLNRNATPARVALGV-TTVLTMTTLMSSTNAALPKI 277
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 373 INYWIQNGAPTHKLVLGISTTGRTWKLDSDSGNSGVPPI 489
+++W+ A ++ LG+ TT T S N+ +P I
Sbjct: 179 VSFWLNRNATPARVALGV-TTVLTMTTLMSSTNAALPKI 216
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1
Query: 373 INYWIQNGAPTHKLVLGIST--TGRTWKLDS 459
+++WI A + ++ LGI+T T T LDS
Sbjct: 264 VSFWIHREATSDRVGLGITTVLTLSTISLDS 294
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 27 DSFEYWIFLAQHQENIRDYPC 89
DS E I L +EN R+Y C
Sbjct: 50 DSSEARIKLINEEENFRNYGC 70
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 44 DLSGTASRKHSGLPLLM 94
D++G +KH PLLM
Sbjct: 131 DIAGLRKKKHKVNPLLM 147
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 170 ICS*LSAFCQT*IAPFTLTS 229
IC+ L+A CQ + F +TS
Sbjct: 644 ICTKLTADCQPGVTAFIVTS 663
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -1
Query: 367 RRRFVEDRGSAVRKSVQCSPPLWGYVQVY 281
R+ + EDR +R+ P + QVY
Sbjct: 14 RQVYGEDRWEEIRRQASVEQPSFSVHQVY 42
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.6 bits (41), Expect = 9.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 373 INYWIQNGAPTHKLVLGISTTGRTWKLDSDSGNS 474
+++W+ A ++VLG +T L S NS
Sbjct: 251 VSFWLHMDASPPRIVLGTNTILTFMTLASKVENS 284
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 373 INYWIQNGAPTHKLVLGIST 432
+++W+ A ++ LGI+T
Sbjct: 233 VSFWLNREATADRVSLGITT 252
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -3
Query: 125 VKPSLCSDSLSSTGVVPNVFL 63
V ++CSD S GV+ ++ +
Sbjct: 971 VNETVCSDYFSQGGVIESIMV 991
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 250 DIVNIQAFDYYTPERNP 300
D+V FD+Y PE P
Sbjct: 43 DMVGRSLFDFYHPEDLP 59
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.314 0.133 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,983
Number of Sequences: 438
Number of extensions: 2814
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
- SilkBase 1999-2023 -