Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N17
(530 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_579| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 9e-27
SB_580| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 38 0.004
SB_55396| Best HMM Match : Sod_Cu (HMM E-Value=1.5e-07) 35 0.036
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 1.8
SB_54208| Best HMM Match : fn3 (HMM E-Value=0) 29 3.1
SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2) 29 3.1
SB_1850| Best HMM Match : fn3 (HMM E-Value=7.5e-22) 29 3.1
SB_40049| Best HMM Match : LRR_1 (HMM E-Value=0.082) 28 4.1
SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_46813| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_7074| Best HMM Match : rve (HMM E-Value=0.019) 28 5.4
SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_28074| Best HMM Match : Helicase_C (HMM E-Value=4.2) 27 7.2
SB_56799| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_48312| Best HMM Match : OAR (HMM E-Value=2.8) 27 9.5
SB_47476| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 27 9.5
SB_20584| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_14913| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 9.5
SB_5214| Best HMM Match : SAP (HMM E-Value=0.8) 27 9.5
SB_35761| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 9.5
SB_34445| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 9.5
SB_19211| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 116 bits (280), Expect = 9e-27
Identities = 53/106 (50%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = +1
Query: 97 LPDGK-VHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVG 273
+ +GK + G+I GL G++GFH+H GD + GC S G HFNP KEHG PSDENRHVG
Sbjct: 22 MAEGKPCKITGTIEGLKAGNHGFHIHVYGDNTNGCVSAGPHFNPFKKEHGGPSDENRHVG 81
Query: 274 DLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGR 411
DLGN + + IDM D + + G H ++GR+VV+H DD GR
Sbjct: 82 DLGNVVAGDDGKACIDMTDALVTLVGEHSVVGRSVVVHADEDDLGR 127
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 417 HPDSRKTGNAGGRVACGVIGI 479
H DS+ TG+AGGR+ACGVIGI
Sbjct: 130 HEDSKTTGHAGGRLACGVIGI 150
>SB_580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 238 HGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVV 381
HG P D++RH+GDLGN E D N + + + D +++TG I+GR++V
Sbjct: 2 HGAPEDKDRHLGDLGNIEADANGIADVSITDCLVSLTGQCSIIGRSLV 49
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 38.3 bits (85), Expect = 0.004
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Frame = +1
Query: 70 IRGNITFTRL-PDGKVHVEGSIVGLPPGHYGFHVHE-----KGDISGGCGST--GSHFNP 225
IRG +TFT+ P+ +++ ++ G+ + +H+ KG+ + C + G+ ++P
Sbjct: 66 IRGTVTFTQSSPNTSTNIKLALTGVNET-LSWQIHDLPVIYKGNAATTCNTVALGNLYDP 124
Query: 226 ENKEHGHPSDENRH---VGDL-GNAEF-DKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 390
+ S + VGDL G F D N S + D +L +TG HGI GR +VL +
Sbjct: 125 DGTATAQCSAAQKKSCAVGDLRGKFGFIDGNNMSSV-FHDSNLPLTGRHGIFGRTLVL-K 182
Query: 391 RADDF---GRLTTQIREKPATLVDASPAVSSEY 480
+D F +T+++ A P + Y
Sbjct: 183 TSDVFKACAIITSEVTPTTALATFKKPVAGTVY 215
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Frame = +1
Query: 154 YGFHVHEK--GDI------SGGCGSTGSHFNPEN 231
+ +HVHEK GD G C S G H+NP N
Sbjct: 387 HNWHVHEKPVGDDMTKPVDDGRCSSLGPHYNPYN 420
>SB_55396| Best HMM Match : Sod_Cu (HMM E-Value=1.5e-07)
Length = 100
Score = 35.1 bits (77), Expect = 0.036
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 265 HVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGR 411
HVGDLGN ++N + D + + I+GRA+V+H DD GR
Sbjct: 1 HVGDLGNIIANQNGRATFRFEDKTVKVWD---IIGRAIVVHADEDDLGR 46
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 417 HPDSRKTGNAGGRVACGVI 473
H S+ TGN+G RV CG+I
Sbjct: 49 HELSKSTGNSGARVGCGII 67
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 76 GNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDI-----SGGCGSTGSHFNPENK 234
G ITFTRLP +V V L + FHV E +I + G + GSH N +NK
Sbjct: 560 GLITFTRLPPSQVQVFEGTHNLSL-TWSFHVVEGENIFTLSFNRGENTIGSHSNDDNK 616
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 200 PQPPDMSPFSWTWNP*WPGGSPTIDPSTWTLPSGSRVNVILPLMFSPT 57
P P MSP S +++P PG SP+ PS+ P+ + P +SPT
Sbjct: 421 PSSPSMSPASPSYSPTSPGYSPS-SPSSGYSPASPSYSPTSP-SYSPT 466
>SB_54208| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1292
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 355 HGILGRAVVLHERADDFGRLTTQIREKPATLVDAS 459
HGIL VV++ RADD R TTQ P T +S
Sbjct: 321 HGILRYIVVVYHRADD--RTTTQEYRHPMTSYHSS 353
>SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2)
Length = 508
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 136 GLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRH 267
G P YG H G S G G + + + +GHPS H
Sbjct: 317 GHPSTRYGPHSTRYGHPSTGYGHPSTRYGHPSTRYGHPSTRYGH 360
>SB_1850| Best HMM Match : fn3 (HMM E-Value=7.5e-22)
Length = 461
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 355 HGILGRAVVLHERADDFGRLTTQIREKPATLVDAS 459
HGIL VV++ RADD R TTQ P T +S
Sbjct: 423 HGILRYIVVVYHRADD--RTTTQEYRHPMTSYHSS 455
>SB_40049| Best HMM Match : LRR_1 (HMM E-Value=0.082)
Length = 380
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 217 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHL 339
F PE E DEN GD+ N + D Y ++ DP L
Sbjct: 333 FYPEFDEEDDDDDENEFEGDMANGD-DHFYEDFLEAEDPAL 372
>SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/85 (24%), Positives = 30/85 (35%)
Frame = +1
Query: 16 HHERSQPTRAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGG 195
HH T + ++ GN T + HV+G+ PG+ HV G +
Sbjct: 829 HHVPGYTTHHVPGNTAHHVPGNTTHHVPGNTTYHVQGNTAHHVPGNKTHHV--PGYTTHH 886
Query: 196 CGSTGSHFNPENKEHGHPSDENRHV 270
+H P N H P HV
Sbjct: 887 VPGNTTHHVPGNTTHHVPGYTTHHV 911
>SB_46813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 173 VEGESVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 210
>SB_7074| Best HMM Match : rve (HMM E-Value=0.019)
Length = 217
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 452 STSVAGFSRIWVVRRPKSSARSCRTTALPRIPC 354
S S+AG+ + VR + S R R TA +PC
Sbjct: 179 SLSIAGWHSAYFVRSTRRSLRPARQTASGLLPC 211
>SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1301
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 142 PPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVGDLGNAEFDKNY 306
P H H I G +G+ NKE H D+++ V LGN D+++
Sbjct: 344 PSNHNDKHASGSEGILFDTGKSGT----TNKEEPHEIDDHKKVESLGNLSSDEDF 394
>SB_28074| Best HMM Match : Helicase_C (HMM E-Value=4.2)
Length = 366
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 274 DLGNAEFDKNYSSKIDMIDPHLAI 345
DLG KN+++K+D I PHL I
Sbjct: 96 DLGIILLVKNFNAKLDNIGPHLKI 119
>SB_56799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 100 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 137
>SB_48312| Best HMM Match : OAR (HMM E-Value=2.8)
Length = 87
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 29 RSRHGLSPIWSGRTSEAILRSLGCLTAR 112
R+RHGL+P W T + R G T R
Sbjct: 47 RARHGLAPRWRPNTRSSFSRPSGPSTRR 74
>SB_47476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 132 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 169
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 891 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 928
>SB_20584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 173 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 210
>SB_14913| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 528
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 214 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 251
>SB_5214| Best HMM Match : SAP (HMM E-Value=0.8)
Length = 660
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 321 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 358
>SB_35761| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 414
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 100 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 137
>SB_34445| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 371
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 118 VEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPEN 231
VEG V G H+ DI GCG + HF N
Sbjct: 57 VEGEGVWWKKVEDGVEFHDVTDIPSGCGPSLHHFRSSN 94
>SB_19211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 29 RSRHGLSPIWSGRTSEAILRSLGCLTAR 112
R+RHGL+P W T + R G T R
Sbjct: 184 RARHGLAPRWRPNTRSSFSRPSGPSTRR 211
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,589,325
Number of Sequences: 59808
Number of extensions: 385394
Number of successful extensions: 1512
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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