BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N17
(530 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismuta... 131 1e-32
AY745233-1|AAU93512.1| 100|Anopheles gambiae SOD3B protein. 58 1e-10
AY745232-1|AAU93511.1| 75|Anopheles gambiae SOD3A protein. 49 8e-08
DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein. 25 1.6
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 25 2.1
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 25 2.1
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 3.7
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 4.8
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 6.4
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 23 6.4
AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein. 23 8.4
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 23 8.4
>AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismutase
2 protein.
Length = 211
Score = 131 bits (317), Expect = 1e-32
Identities = 57/131 (43%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Frame = +1
Query: 25 RSQPTRAIAHLVGEN-IRGNITFTRLPDGK-VHVEGSIVGLPPGHYGFHVHEKGDISGGC 198
+ QP +AI +L G + + GN+T ++ + V ++ ++VGL PG +GFH+HEKGD++ GC
Sbjct: 17 KDQPRKAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGC 76
Query: 199 GSTGSHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAV 378
STG H+NP+ HG P+D+ RHVGDLGN D+N +K D +++ GA ++GRA+
Sbjct: 77 ASTGGHYNPDKVSHGAPNDQVRHVGDLGNIAADENGIAKTSYSDTVVSLYGARSVIGRAI 136
Query: 379 VLHERADDFGR 411
V+H DD G+
Sbjct: 137 VIHAEVDDLGK 147
Score = 49.2 bits (112), Expect = 8e-08
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3
Query: 414 DHPDSRKTGNAGGRVACGVIGIL 482
+HPDS KTGNAGGRVACGVIGIL
Sbjct: 149 NHPDSLKTGNAGGRVACGVIGIL 171
>AY745233-1|AAU93512.1| 100|Anopheles gambiae SOD3B protein.
Length = 100
Score = 58.4 bits (135), Expect = 1e-10
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +1
Query: 217 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 396
+NP+ +HG P D N HVGDLGN +KI + + L + G I+GR + + E
Sbjct: 1 YNPDGNDHGAPDDANCHVGDLGNIVAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYE 60
Query: 397 DDFGR 411
DD GR
Sbjct: 61 DDLGR 65
Score = 29.1 bits (62), Expect = 0.097
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 417 HPDSRKTGNAGGRVACGVIGI 479
H S+ TGN+G +AC +IG+
Sbjct: 68 HDYSKTTGNSGNCIACAIIGV 88
>AY745232-1|AAU93511.1| 75|Anopheles gambiae SOD3A protein.
Length = 75
Score = 49.2 bits (112), Expect = 8e-08
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +1
Query: 265 HVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFG 408
H GD+GN D+N +K+D+ +A++GA ++GR++V+H DD G
Sbjct: 1 HAGDMGNIVADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLG 48
Score = 32.7 bits (71), Expect = 0.008
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 417 HPDSRKTGNAGGRVACGVIGI 479
H S+ TG+AG R+ACGVIG+
Sbjct: 52 HELSKTTGDAGARLACGVIGL 72
>DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein.
Length = 553
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 230 FSGLK*EPVEPQPPDMSPF 174
F GL EP EPQ ++ PF
Sbjct: 272 FKGLWSEPFEPQATELKPF 290
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 24.6 bits (51), Expect = 2.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 169 HEKGDISGGCGSTGSHFNPENKEHGHPSDENRH 267
H +S G GST + + + H HP + H
Sbjct: 476 HSPHHVSPGMGSTVNGASLTHSHHAHPHHHHHH 508
Score = 23.4 bits (48), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 148 GHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDEN 261
G Y + + G SGG S SH +P + G S N
Sbjct: 453 GDYMNNCLQSGYFSGGFSSLHSHHSPHHVSPGMGSTVN 490
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 24.6 bits (51), Expect = 2.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 139 LPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVG 273
L P + H+H+ +S G GS G H + GH + + H+G
Sbjct: 324 LEPSLHLSHLHQMSAMSMGMGSMGLH----HHHPGHHAALHAHLG 364
Score = 23.4 bits (48), Expect = 4.8
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 136 GLPPGHYGFHVHEKGDISGGCGSTGSHF--NPENKEHGHPSDENRHVGDLG 282
G PG G G SGG GS H NP H H + G G
Sbjct: 88 GPSPGAGGTGSGGSGGGSGGIGSGALHLGQNPNLHHHHHHHHHGNNGGGNG 138
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.8 bits (49), Expect = 3.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 178 GDISGGCGSTGSHFNPENKEHGHPSDE 258
G GG G+TG+ +N+ + H + E
Sbjct: 569 GRAGGGVGATGAEKQQQNRSNHHRTTE 595
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 4.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 274 DLGNAEFDKNYSSKIDMIDPHLAITGAHGILG 369
D G ++FD+ ++ I H+AI A G+ G
Sbjct: 426 DSGASDFDRVTPEELQEIAAHMAIRKAPGLDG 457
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.0 bits (47), Expect = 6.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 429 SNLGGQAAEIISPLV*NHSPAENPVCSGNG 340
S LG A + SP++ S A +P S NG
Sbjct: 186 SPLGSLLAAVTSPVLSRISSASSPNLSSNG 215
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 23.0 bits (47), Expect = 6.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 293 NSALPRSPTWRFSSLGWP 240
N LP + +RF + GWP
Sbjct: 569 NINLPETEQFRFCNCGWP 586
>AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein.
Length = 304
Score = 22.6 bits (46), Expect = 8.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 415 TTQIREKPATLVDASPAVSSEYCKTSLYL 501
TTQ+R +D + A + + CK Y+
Sbjct: 159 TTQVRRLRRRALDCTGAPNEQCCKQKFYV 187
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 22.6 bits (46), Expect = 8.4
Identities = 6/22 (27%), Positives = 16/22 (72%)
Frame = +1
Query: 7 VSGHHERSQPTRAIAHLVGENI 72
+ G +++ ++I+H++G+NI
Sbjct: 359 IFGRYKKGMNYKSISHIIGKNI 380
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,030
Number of Sequences: 2352
Number of extensions: 13804
Number of successful extensions: 47
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -