Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N17
(530 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g18100.1 68418.m02125 superoxide dismutase [Cu-Zn] / copper/z... 130 6e-31
At1g08830.1 68414.m00983 superoxide dismutase [Cu-Zn] (SODCC) / ... 123 7e-29
At2g28190.1 68415.m03423 superoxide dismutase [Cu-Zn], chloropla... 120 8e-28
At1g12520.1 68414.m01449 superoxide dismutase copper chaperone, ... 62 3e-10
At1g10970.1 68414.m01259 metal transporter, putative (ZIP4) simi... 31 0.37
At4g38660.1 68417.m05473 thaumatin, putative similar to thaumati... 30 1.1
At3g54230.1 68416.m05994 zinc finger protein-related / D111/G-pa... 29 1.5
At3g11870.1 68416.m01455 protein kinase-related contains eukaryo... 29 1.5
At5g61350.1 68418.m07698 protein kinase family protein contains ... 28 4.5
At1g15780.1 68414.m01893 expressed protein 28 4.5
At4g24800.1 68417.m03552 MA3 domain-containing protein similar t... 27 6.0
At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 27 6.0
At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 27 6.0
At5g19740.1 68418.m02347 peptidase M28 family protein ileal pept... 27 7.9
At4g07670.1 68417.m01203 protease-associated (PA) domain-contain... 27 7.9
At2g21280.1 68415.m02533 expressed protein similar to YfhF (GI:2... 27 7.9
At1g60960.1 68414.m06862 metal transporter, putative (IRT3) iden... 27 7.9
>At5g18100.1 68418.m02125 superoxide dismutase [Cu-Zn] / copper/zinc
superoxide dismutase (CSD3) identical to copper/zinc
superoxide dismutase GI:3273755
Length = 164
Score = 130 bits (314), Expect = 6e-31
Identities = 60/125 (48%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Frame = +1
Query: 40 RAIAHLVGEN-IRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 216
RA+A + G+N +RG + F + G HV G I GL PG +GFH+H GD + GC STG H
Sbjct: 9 RAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPH 68
Query: 217 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 396
FNP N+ HG P++E RH GDLGN N ++I + D H+ ++G + ILGRAVV+H
Sbjct: 69 FNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHADP 128
Query: 397 DDFGR 411
DD G+
Sbjct: 129 DDLGK 133
Score = 34.3 bits (75), Expect = 0.052
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 417 HPDSRKTGNAGGRVACGVIGI 479
H S+ TGNAG RV CG+IG+
Sbjct: 136 HKLSKSTGNAGSRVGCGIIGL 156
>At1g08830.1 68414.m00983 superoxide dismutase [Cu-Zn] (SODCC) /
copper/zinc superoxide dismutase (CSD1) identical to
SWISS-PROT: P24704
Length = 152
Score = 123 bits (297), Expect = 7e-29
Identities = 55/116 (47%), Positives = 72/116 (62%)
Frame = +1
Query: 64 ENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHG 243
E + G I FT+ DG V G++ GL PG +GFHVH GD + GC STG HFNP+ K HG
Sbjct: 12 EGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHG 71
Query: 244 HPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGR 411
P D NRH GDLGN + ++ + D + +TG + I+GRAVV+H DD G+
Sbjct: 72 APEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGK 127
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 417 HPDSRKTGNAGGRVACGVIGI 479
H S TGNAGGRVACG+IG+
Sbjct: 130 HELSLATGNAGGRVACGIIGL 150
>At2g28190.1 68415.m03423 superoxide dismutase [Cu-Zn], chloroplast
(SODCP) / copper/zinc superoxide dismutase (CSD2)
identical to GP:3273753:AF061519
Length = 216
Score = 120 bits (288), Expect = 8e-28
Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Frame = +1
Query: 28 SQPTRAIAHLVG-ENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGS 204
S +A+A L G ++ G +T T+ G V I GL PG +GFH+HE GD + GC S
Sbjct: 62 SAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCIS 121
Query: 205 TGSHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVL 384
TG HFNP N HG P DE RH GDLGN + + ++ ++D + +TG + ++GRA V+
Sbjct: 122 TGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVV 181
Query: 385 HERADDFGR 411
HE DD G+
Sbjct: 182 HELKDDLGK 190
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 417 HPDSRKTGNAGGRVACGVIGI 479
H S TGNAGGR+ACGVIG+
Sbjct: 193 HELSLTTGNAGGRLACGVIGL 213
>At1g12520.1 68414.m01449 superoxide dismutase copper chaperone,
putative similar to copper chaperone for superoxide
dismutase [Homo sapiens] gi|2431868|gb|AAC51764
Length = 254
Score = 61.7 bits (143), Expect = 3e-10
Identities = 37/120 (30%), Positives = 61/120 (50%)
Frame = +1
Query: 43 AIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFN 222
A+A G +I G + F ++ +E + GL PG + + ++E GD++ G STGS +N
Sbjct: 98 AVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCINEYGDLTNGAASTGSLYN 157
Query: 223 PENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADD 402
P + G +GDLG E DKN + L + ++GRAVV+++ D+
Sbjct: 158 PFQDQTG-----TEPLGDLGTLEADKNGEAFYSGKKEKLKVA---DLIGRAVVVYKTDDN 209
>At1g10970.1 68414.m01259 metal transporter, putative (ZIP4) similar
to Zn and Cd transporter ZNT1 [Thlaspi caerulescens]
gi|7381054|gb|AAF61374; member of the Zinc (Zn2+)-Iron
(Fe2+) permease (ZIP) family, PMID:11500563
Length = 408
Score = 31.5 bits (68), Expect = 0.37
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +1
Query: 43 AIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFN 222
A+ +VGE + N F G +H IVG+ H H H + G C +H +
Sbjct: 182 AVVPVVGERVTDNKVFGEEDGGGIH----IVGI-RAHAAHHRHSHSNSHGTCDG-HAHGH 235
Query: 223 PENKEHGHPSDEN--RHV 270
HG+ EN RHV
Sbjct: 236 SHGHMHGNSDVENGARHV 253
>At4g38660.1 68417.m05473 thaumatin, putative similar to
thaumatin-like protein [Arabidopsis thaliana]
GI:2435406, thaumatin-like protein precursor [Pyrus
pyrifolia] GI:3241854; contains Pfam profile PF00314:
Thaumatin family
Length = 345
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -1
Query: 152 WPG-----GSPTIDPSTWTLPSGSRVNVILPLMFSPTRWAIARVGCE 27
WPG GSPT+ + + LP G+ ++ P +S W AR GC+
Sbjct: 43 WPGILSNAGSPTLSTTGFELPKGTSRSLQAPTGWSGRFW--ARTGCK 87
>At3g54230.1 68416.m05994 zinc finger protein-related / D111/G-patch
domain-containing protein / RNA recognition motif
(RRM)-containing protein KIAA0122 gene , Homo sapiens,
EMBL:HSDKG02; contains Pfam profiles PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF01585: G-patch domain, weak hit to PF00641: Zn-finger
in Ran binding protein and others
Length = 1105
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +1
Query: 127 SIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNP-ENKEHGHPSDENRHVG-DLGNAEFDK 300
S G GHY H HE+ GC + N +K + H D+ R D +D
Sbjct: 124 SEAGSRNGHYRDHEHERSSRYDGCDDYSCNDNNYRSKNYHHSRDDGREKDYDYTRRSYDS 183
Query: 301 NY 306
Y
Sbjct: 184 EY 185
>At3g11870.1 68416.m01455 protein kinase-related contains eukaryotic
protein kinase domain, INTERPRO:IPR000719
Length = 554
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 166 VHEKGDISGGCGSTGSHFNPENKEHGHPSDEN 261
V +K D SGG G N E+K PSD+N
Sbjct: 58 VEKKSDPSGGLGEENEKTNSESKVLSVPSDQN 89
>At5g61350.1 68418.m07698 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 842
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = -1
Query: 191 PDMSPFSWTW---NP*--WPGGSP--TIDPSTWTLPSGSRVNVILP 75
P + P S TW P +P GS T+DPST T P G +I P
Sbjct: 228 PKIDPLSRTWLSDKPYNTFPEGSRNVTVDPSTITYPDGGATALIAP 273
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -1
Query: 164 WNP*WPGGSPTIDPSTW--TLPSGSRVNVILPLM 69
W P P G P +D W LP SR ++ +M
Sbjct: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIM 39
>At4g24800.1 68417.m03552 MA3 domain-containing protein similar to
programmed cell death 4 protein [Gallus gallus]
GI:12958564; contains Pfam profile PF02847: MA3 domain
Length = 702
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 106 GKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVGD 276
GK + V H G + K D GG G+ G + + H P+D N G+
Sbjct: 44 GKASGASNAVKHRRSHAGRSIRSKKDGGGGKGNWGKLIDTDGDYHIDPNDPNYDSGE 100
>At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 148 GHYGFHVHEKGDISGGCGSTGSHFNPENKE---HGHPSDENRHVGDLGNAEFDKN 303
GH H H+ + S G T H + +++ HGH D++ GD+ DK+
Sbjct: 189 GHGHGHGHDHHNHSHGVTVTTHHHHHDHEHGHSHGHGEDKHHAHGDVTEQLLDKS 243
>At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 148 GHYGFHVHEKGDISGGCGSTGSHFNPENKE---HGHPSDENRHVGDLGNAEFDKN 303
GH H H+ + S G T H + +++ HGH D++ GD+ DK+
Sbjct: 189 GHGHGHGHDHHNHSHGVTVTTHHHHHDHEHGHSHGHGEDKHHAHGDVTEQLLDKS 243
>At5g19740.1 68418.m02347 peptidase M28 family protein ileal
peptidase I100 - Rattus norvegicus, EMBL:AF009921;
contains Pfam profiles PF04389: Peptidase family M28,
PF02225: PA domain
Length = 681
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 146 GGSPTIDPSTWTLPSGSRVNVILPLMFSPTRWAIARV-GCER 24
GG S W PSG +V + + PT A V GCER
Sbjct: 206 GGDEWFPASKWMPPSGVQVGTVYNGLGDPTTPGWASVDGCER 247
>At4g07670.1 68417.m01203 protease-associated (PA) domain-containing
protein similar to PF02225: PA domain; similar to
N-acetylated-alpha-linked acidic dipeptidase II
(NAALADase II) (SP:Q9Y3Q) {Homo sapiens};similar to
Glutamate carboxypeptidase II (Membrane glutamate
carboxypeptidase) (mGCP) (N-acetylated-alpha-linked
acidic dipeptidase I) (NAALADase I)
(Pteroylpoly-gamma-glutamate
carboxypeptidase)(Folylpoly-gamma-glutamate
carboxypeptidase) (FGCP) (Folate hydrolase 1)
(Prostate-specific membrane antigen homolog) (SP|O77564)
{Sus scrofa}
Length = 280
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 146 GGSPTIDPSTWTLPSGSRVNVILPLMFSPTRWAIARV-GCER 24
GG S W PSG +V + + PT A V GCER
Sbjct: 71 GGDEWFPASKWMPPSGFQVGTVYNGLGDPTTPGWASVDGCER 112
>At2g21280.1 68415.m02533 expressed protein similar to YfhF
(GI:2804536) [Bacillus subtilis]
Length = 347
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 337 LAITGAHGILGRAVVLHERADDFG-RLTTQIREKPATLVDA 456
+++TGA G +GR +V RAD+ R+ T+ + K + A
Sbjct: 48 VSVTGATGFIGRRLVQRLRADNHAIRVLTRSKSKAEQIFPA 88
>At1g60960.1 68414.m06862 metal transporter, putative (IRT3)
identical to putative metal transporter IRT3
[Arabidopsis thaliana] gi|17385796|gb|AAL38438; similar
to iron-regulated transporter 1 [Lycopersicon
esculentum] gi|9716481|gb|AAF97509; member of the Zinc
(Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563
Length = 425
Score = 27.1 bits (57), Expect = 7.9
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 7/81 (8%)
Frame = +1
Query: 25 RSQPTRAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGL-------PPGHYGFHVHEKGD 183
R Q + ++GE F G +H+ G PPGH H K D
Sbjct: 180 REQSPGIVVPMIGEGTNDGKVFGEEDSGGIHIVGIHAHAAHHRHSHPPGHDSCEGHSKID 239
Query: 184 ISGGCGSTGSHFNPENKEHGH 246
I G +H + HGH
Sbjct: 240 I----GHAHAHGHGHGHGHGH 256
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,252,207
Number of Sequences: 28952
Number of extensions: 279457
Number of successful extensions: 781
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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