Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N16
         (638 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000038D794 Cluster: COG1216: Predicted glycosyltrans...    33   7.7  

>UniRef50_UPI000038D794 Cluster: COG1216: Predicted
           glycosyltransferases; n=1; Nostoc punctiforme PCC
           73102|Rep: COG1216: Predicted glycosyltransferases -
           Nostoc punctiforme PCC 73102
          Length = 309

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
 Frame = -3

Query: 354 SWCSVNNLPPSIVYIFSL*EDFQYKLTL-----HQSIN*WYILHNHIGKPPHVQTVTQTR 190
           S  +   + P  V +F    D  Y L L     H  I    I+H++ G P  V+ + + R
Sbjct: 171 SLAAAKTISPPCVDLFIDGIDLDYGLRLRQKGFHNLIATKAIMHHNFGSPIQVKFMNKYR 230

Query: 189 FILYYS*LTFFFY-SEPTYLLTAFSIG 112
           +I  YS L +++     +YL T FS G
Sbjct: 231 YIQQYSALRYYYICRNHSYLETRFSQG 257


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,938,324
Number of Sequences: 1657284
Number of extensions: 12136433
Number of successful extensions: 21123
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21109
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)