Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N15
(418 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 28 0.67
SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces p... 27 1.2
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 26 2.7
SPBC18H10.09 |||zinc finger protein, zf-CHY type|Schizosaccharom... 25 3.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 25 4.7
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 4.7
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 24 8.2
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 24 8.2
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 24 8.2
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 24 8.2
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 24 8.2
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 27.9 bits (59), Expect = 0.67
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 28 TILAVLLGLVALTYVNGNKVKSYICQG-YYGCEKCCVHLGSGCEKLKSSPFW 180
T+L + L LV+ T + + C G YY CCV +GS C + S+P++
Sbjct: 9 TVLTLALSLVSKTSASQCSPRYGTCGGIYYDGPTCCV-VGSSC--IYSNPWY 57
>SPAC13C5.04 |||glutamine amidotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 1.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 81 ITVDVSQGYEAQ*NSQDCEFRHF 13
+ VDV +G+E +++DCEF+ F
Sbjct: 162 MAVDVPEGFELLGSTEDCEFQIF 184
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.8 bits (54), Expect = 2.7
Identities = 18/55 (32%), Positives = 21/55 (38%)
Frame = -3
Query: 278 LNTSKFNSLMESPKYGSTPSGQVQVQTSV*LPNQNGEDFNFSQPEPR*TQHFSQP 114
L+ FN + K V V PNQ + NFS QHFSQP
Sbjct: 192 LDPEVFNQQSKETKKSLQVPPSRNVPPPVTRPNQYNPEPNFSLSSGYPQQHFSQP 246
>SPBC18H10.09 |||zinc finger protein, zf-CHY
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 3.6
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 64 TYVNGNKVKSYIC--QGYYGCEKCCVHLGSGCEKLKSSPFWFG 186
T+ + N++ C + +Y + C H G+ K ++S +W G
Sbjct: 361 TFEHANRIICGYCAMESFYKKDATCPHCGNMTVKKQTSAYWEG 403
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.0 bits (52), Expect = 4.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 108 ILRLREMLCSPWFRLREVKIL 170
+L+L E + PW REVK+L
Sbjct: 120 VLKLLENMPMPWEEYREVKVL 140
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 25.0 bits (52), Expect = 4.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 417 IKTYSKPIHYNMKKLKPMNGFFYLKQARTLI 325
+ TY + I YN K + GF Y+ T+I
Sbjct: 433 VTTYERIITYNANKSVDVRGFPYIPDEDTII 463
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 24.2 bits (50), Expect = 8.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 417 IKTYSKPIHYNMKKLKPMNGFFYLKQARTLI 325
+ TY + + +N K + GF Y+ T+I
Sbjct: 469 VATYERVVTFNANKSVDVRGFPYIPDENTII 499
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.2 bits (50), Expect = 8.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 373 ETNEWFFLFKTSSNSHCFYT 314
E N+W L+K S N+ YT
Sbjct: 719 EINDWIGLYKLSDNASDLYT 738
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 24.2 bits (50), Expect = 8.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 417 IKTYSKPIHYNMKKLKPMNGFFYLKQARTLI 325
+ TY + + +N K + GF Y+ T+I
Sbjct: 469 VATYERVVTFNANKSVDVRGFPYIPDENTII 499
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 24.2 bits (50), Expect = 8.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 4 TRNEMSKFTILAVLLGLVALTYVNGNKVKSYIC 102
T E+ FTIL + GL+ + N + +Y C
Sbjct: 684 THLEIEPFTILGAVAGLIPYPHHNQSPRNTYQC 716
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 24.2 bits (50), Expect = 8.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 351 YLKQARTLIVFILLITLKTID 289
YL + RTL+ F L+ KTID
Sbjct: 872 YLNRERTLLNFYLIENSKTID 892
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,693,026
Number of Sequences: 5004
Number of extensions: 33295
Number of successful extensions: 99
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 146319408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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