Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N14
(597 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0330 - 16446685-16446776,16446968-16447119,16447172-164472... 144 5e-35
01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,619... 142 1e-34
10_08_0473 - 18168147-18169396,18169756-18169878,18170002-18170065 29 2.1
08_02_1062 - 24016832-24016880,24016946-24016992,24017065-240171... 29 2.8
06_03_1041 - 27086661-27086981,27087089-27087295,27087398-270876... 29 2.8
02_05_0953 - 33027007-33029079 29 2.8
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 29 2.8
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 28 4.9
05_03_0586 + 15782645-15782721,15782781-15783405 28 4.9
02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213 27 8.6
>11_04_0330 -
16446685-16446776,16446968-16447119,16447172-16447281,
16447518-16447619,16447705-16447854,16448195-16448350,
16448552-16448713,16449549-16449638,16450152-16450271,
16451323-16451418,16451502-16451638,16453400-16453622
Length = 529
Score = 144 bits (349), Expect = 5e-35
Identities = 78/179 (43%), Positives = 111/179 (62%), Gaps = 12/179 (6%)
Frame = +2
Query: 2 VEGLVAIPGEDASKEDQIEGLVNNVKWQMSSDRKAGPLKLLQGLIWKQGYDKGEIKGHIY 181
+ G V IP +DA KE+ I LV NV+ + +DRK LK LQG IW+ G++ E++G ++
Sbjct: 337 IVGSVPIPPDDADKEEVINALVANVESMIKADRKITSLKQLQGHIWRTGFESKELQGVVF 396
Query: 182 DDVSPALEQWRSTEGQKIYIYSSGSVQAQKLLFGQSSAGDLLPLIDGHFDTAVGP----- 346
DDV AL+ W ++ G K+YIYSSGS +AQ+LLFG ++ GDL + G FDT G
Sbjct: 397 DDVPEALKHWHAS-GMKVYIYSSGSREAQRLLFGNTAYGDLRQYLCGFFDTTTGEIMIPS 455
Query: 347 ------KQESTSYTMISEKIGCKT-EDILFLTDIVKEAEAARSSGMHAALVSREGNGPL 502
K+E+ SY IS+ +G + ILF+TD+ +EA AA+S+G + R GN PL
Sbjct: 456 RINRSNKRETRSYFEISQSLGVDSPAQILFITDVFQEAVAAKSAGFEVIISIRPGNAPL 514
>01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,
61996-62114,62248-62345
Length = 1149
Score = 142 bits (345), Expect = 1e-34
Identities = 79/190 (41%), Positives = 118/190 (62%), Gaps = 5/190 (2%)
Frame = +2
Query: 2 VEGLVAIPGEDASKEDQ---IEGLVNNVKWQMSSDRKAGPLKLLQGLIWKQGYDKGEIKG 172
V+G VA+P DA E + +E L NV+ + +DRK LK LQG IW++G+D GE++
Sbjct: 966 VDGAVAVP-PDAEGEGEGAVVEALAANVESMIRADRKVTALKQLQGRIWRRGFDSGELRS 1024
Query: 173 HIYDDVSPALEQWRSTEGQKIYIYSSGSVQAQKLLFGQSSA-GDLLPLIDGHFDTAVGPK 349
+YDD + AL +WR+ K YIYSSGS +AQ+L+F ++A GDL + G FDT +G K
Sbjct: 1025 EVYDDAADALRRWRA----KAYIYSSGSREAQRLIFANTAAHGDLRDHLCGFFDTTIGAK 1080
Query: 350 QESTSYTMISEKIGC-KTEDILFLTDIVKEAEAARSSGMHAALVSREGNGPLSTEATASF 526
+E +SY I + +G + ILFLTD+ +EA AA+++G+ + R GN PL F
Sbjct: 1081 REVSSYYEIWQTLGTDRPSQILFLTDVYQEAAAAKTAGLEVIISVRPGNAPLPD--NHGF 1138
Query: 527 PVLHSFVQLT 556
+ SF +++
Sbjct: 1139 HTITSFAEIS 1148
>10_08_0473 - 18168147-18169396,18169756-18169878,18170002-18170065
Length = 478
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -1
Query: 585 SSSGLRLLVAVSCTKLCSTGNEAVASVDSGPLPSRLTSAACMPEERAAS 439
S G L + +KL T N AV + +SG S +SAA EE A+
Sbjct: 23 SDGGEALKLKADESKLVVTTNHAVVNTESGDSSSSSSSAAAEEEEEVAA 71
>08_02_1062 -
24016832-24016880,24016946-24016992,24017065-24017124,
24017200-24017259,24017364-24017419,24017891-24017924,
24018015-24018089,24018348-24018398,24018495-24018539,
24019073-24019148,24019495-24019898
Length = 318
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 347 KQESTSYTMISEKIGCKTEDILFLTDIVKEAEAARSSGMHAALVSREGNGPLS-TEATAS 523
K + + Y +EK+G ++++ L + D V +AA+ +GM + ++A A+
Sbjct: 236 KPDPSIYITAAEKLGVQSQNCLVVEDSVIGLQAAKGAGMSCIITYTPSTANQDFSDAIAT 295
Query: 524 FPVL 535
+P L
Sbjct: 296 YPDL 299
>06_03_1041 -
27086661-27086981,27087089-27087295,27087398-27087675,
27088360-27088471
Length = 305
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +2
Query: 176 IYDDVSPALEQWRSTEGQKIYIYSSGSVQAQKLLFGQSSAGDLLPLIDGHFDTAVGPKQE 355
++ D P + +W +G + I S+ + + ++ G F VG ++
Sbjct: 159 VFPDAQPFM-RWLRGKGLTVGIVSNAEYRYKDVILPALGLNQGSEWDFGVFSGIVGVEKP 217
Query: 356 STSYTMISEKIGCKT--EDILFLTDIV-KEAEAARSSGMHAALVSR 484
S I+ ++ K E+ L + D + K+ ARS GMHA L+ R
Sbjct: 218 DPSIYRIALEMAGKVAPEEALHIGDSMRKDYTPARSIGMHALLLDR 263
>02_05_0953 - 33027007-33029079
Length = 690
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +2
Query: 242 YSSGSVQAQKLLFGQSSAGDLLPLIDGHFDTAVGPKQESTSYTMISEKIGCKTEDILFLT 421
++ G+ L FGQ++AG LPL+ G + + S M++ KI
Sbjct: 278 HNRGTYIGTSLYFGQNTAGSFLPLVYGGDAGSALCEYGMLSSNMVTGKIVLCYGTKNTTN 337
Query: 422 DIVKEAEAARSSGMHAAL 475
IV+EA ++ G+ A +
Sbjct: 338 PIVQEAAVQQAGGVGAII 355
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -1
Query: 537 CSTGNEAVASVDSGPL-PSRLTSAACMPEERAAS 439
C GN S DSG L S +TS C E RA S
Sbjct: 1022 CRNGNSCSFSHDSGSLVSSSITSGICSQENRATS 1055
>07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 404 DILFLTDIVKEAEAARSSGMHAALVSREGNGPL 502
DI F ++ E RS G+H +LVS E +GP+
Sbjct: 1018 DIGFYISVL--CEPVRSDGVHGSLVSTEESGPI 1048
>05_03_0586 + 15782645-15782721,15782781-15783405
Length = 233
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 LVAIPGEDASKEDQIEGLVNNVKWQMSSDRKAGPLKLLQGLIWKQ-GYDKGEIKGH 175
LV + G +A KED G V+W +R P+ WK G+D + GH
Sbjct: 113 LVEVAGGEAEKEDGRRGAAGAVRWSRRLER---PIVCCSSACWKAVGHDDQQC-GH 164
>02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213
Length = 320
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 11 LVAIPGEDASKEDQIEGLVNNVKWQMSSDRKAGPLKLLQ 127
LV IPG ++SKE+ N V W S DR P K Q
Sbjct: 93 LVKIPGPESSKEN------NGVMWISSPDRLEDPRKPFQ 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,714,481
Number of Sequences: 37544
Number of extensions: 356659
Number of successful extensions: 1083
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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