Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N14
(597 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g53850.2 68418.m06691 haloacid dehalogenase-like hydrolase fa... 156 1e-38
At5g53850.3 68418.m06693 haloacid dehalogenase-like hydrolase fa... 69 3e-12
At5g53850.1 68418.m06692 haloacid dehalogenase-like hydrolase fa... 69 3e-12
At3g47840.1 68416.m05215 pentatricopeptide (PPR) repeat-containi... 30 1.0
At3g15650.1 68416.m01984 phospholipase/carboxylesterase family p... 30 1.3
At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein ... 29 1.8
At4g39970.1 68417.m05661 haloacid dehalogenase-like hydrolase fa... 29 3.1
At5g33340.1 68418.m03957 aspartyl protease family protein contai... 28 5.4
At1g02110.1 68414.m00137 proline-rich family protein contains pr... 28 5.4
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 27 7.2
At4g33560.1 68417.m04769 expressed protein 27 7.2
At4g03220.1 68417.m00441 F-box family protein ; similar to SKP... 27 7.2
At5g26230.1 68418.m03123 expressed protein predicted protein, Ar... 27 9.5
At4g24610.1 68417.m03525 expressed protein 27 9.5
>At5g53850.2 68418.m06691 haloacid dehalogenase-like hydrolase
family protein low similarity to enolase-phosphatase E-1
enzyme [Klebsiella oxytoca] GI:401712; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 507
Score = 156 bits (378), Expect = 1e-38
Identities = 84/185 (45%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Frame = +2
Query: 2 VEGLVAIPGEDASKEDQIEGLVNNVKWQMSSDRKAGPLKLLQGLIWKQGYDKGEIKGHIY 181
V G V IP D KE I +V+NV+ + +DRK LK LQG IW+ G++ E+K ++
Sbjct: 326 VTGAVPIPHADEGKEKVIAAMVSNVEAMIRADRKITALKELQGHIWRTGFECDELKAIVF 385
Query: 182 DDVSPALEQWRSTEGQKIYIYSSGSVQAQKLLFGQSSAGDLLPLIDGHFDTAVGPKQEST 361
+DV+ ALE+W S+ G K+YIYSSGS AQKLLFG + GDL I G FDT +G K+ES
Sbjct: 386 EDVADALEKWHSS-GIKVYIYSSGSRLAQKLLFGNTDYGDLRKYISGFFDTTIGNKKESR 444
Query: 362 SYTMISEKIGC-KTEDILFLTDIVKEAEAARSSGMHAALVSREGNGPLSTEATASFPVLH 538
SY I E +G +I+F+TD+ +EA AA+++G+ A + R GN PL F +
Sbjct: 445 SYKEIKETLGVDDPAEIMFVTDVYQEAVAAKAAGLEAIISIRPGNAPL--PENHGFKTVT 502
Query: 539 SFVQL 553
SF Q+
Sbjct: 503 SFSQI 507
>At5g53850.3 68418.m06693 haloacid dehalogenase-like hydrolase
family protein low similarity to enolase-phosphatase E-1
enzyme [Klebsiella oxytoca] GI:401712; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 418
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +2
Query: 2 VEGLVAIPGEDASKEDQIEGLVNNVKWQMSSDRKAGPLKLLQGLIWKQGYDKGEIKGHIY 181
V G V IP D KE I +V+NV+ + +DRK LK LQG IW+ G++ E+K ++
Sbjct: 342 VTGAVPIPHADEGKEKVIAAMVSNVEAMIRADRKITALKELQGHIWRTGFECDELKAIVF 401
Query: 182 DDVSPALEQWRST 220
+DV+ ALE+W S+
Sbjct: 402 EDVADALEKWHSS 414
>At5g53850.1 68418.m06692 haloacid dehalogenase-like hydrolase
family protein low similarity to enolase-phosphatase E-1
enzyme [Klebsiella oxytoca] GI:401712; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 402
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +2
Query: 2 VEGLVAIPGEDASKEDQIEGLVNNVKWQMSSDRKAGPLKLLQGLIWKQGYDKGEIKGHIY 181
V G V IP D KE I +V+NV+ + +DRK LK LQG IW+ G++ E+K ++
Sbjct: 326 VTGAVPIPHADEGKEKVIAAMVSNVEAMIRADRKITALKELQGHIWRTGFECDELKAIVF 385
Query: 182 DDVSPALEQWRST 220
+DV+ ALE+W S+
Sbjct: 386 EDVADALEKWHSS 398
>At3g47840.1 68416.m05215 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 706
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +2
Query: 200 LEQWRSTEGQKIYIYSS-GSVQAQKLLFGQSSAGDLLPL---IDGHFDTAVGPKQESTSY 367
LEQ + I +YS GS++ ++FG++ D++ L I+G+ + G +E+
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH--GKSKEAIDL 499
Query: 368 TMISEKIGCKTEDILFLT 421
S K+G + + + F++
Sbjct: 500 FEKSLKVGFRPDSVTFIS 517
>At3g15650.1 68416.m01984 phospholipase/carboxylesterase family
protein low similarity to lysophospholipase I [Mus
musculus] GI:1864159; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 255
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 26 GEDASKEDQI-EGL-VNNVKWQMSSDRKAGPLKLLQGLIWKQGYDKGEIKGHIYDDV 190
G++ S Q+ E L + N+KW + + P+ LL G +D GEI ++DD+
Sbjct: 43 GDNGSSSSQLLESLPLPNIKW-ICPTAPSRPVSLLGGFPCTAWFDVGEISEDLHDDI 98
>At2g45470.1 68415.m05655 fasciclin-like arabinogalactan-protein
(FLA8)
Length = 420
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 308 PLIDGHFDTAVGPKQESTSYTMISEKIGCKT-EDILFLTDIVKEAEAARSSGM 463
P+I TA P ++ T + EK GCKT ++L + ++K E+A G+
Sbjct: 171 PIIAPGVLTAPAPSASLSNITGLLEKAGCKTFANLLVSSGVLKTYESAVEKGL 223
>At4g39970.1 68417.m05661 haloacid dehalogenase-like hydrolase
family protein low similarity to SP|P95649 CbbY protein
{Rhodobacter sphaeroides}
Length = 316
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 347 KQESTSYTMISEKIGCKTEDILFLTDIVKEAEAARSSGMHAALVSREGNGPLS-TEATAS 523
K + + Y +EK+G +D L + D V +AA +GM + + +A A
Sbjct: 234 KPDPSIYITAAEKLGVSVKDCLVVEDSVIGLQAATKAGMSCVITYTSSTSDQNFNDAIAV 293
Query: 524 FPVL 535
+P L
Sbjct: 294 YPDL 297
>At5g33340.1 68418.m03957 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 437
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 287 SSAGDL-LPLIDGHFDTAVGPKQESTSYTMISEKIGC 394
S+ GDL +P+I HFD A S ++ +SE + C
Sbjct: 360 SATGDLKVPVITMHFDGADVKLDSSNAFVQVSEDLVC 396
>At1g02110.1 68414.m00137 proline-rich family protein contains
proline-rich domain, INTERPRO:IPR000694
Length = 679
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 105 LAHSNYCKD*FGSRDMTRVKLKATYMMTFLRPLNNGDPRRVRRYTFTL 248
L HS++C+ R+ L A + ++ + PL+NGDP++ R +F L
Sbjct: 478 LWHSSFCRIIKFQREFI-CSLHAWFKLSLV-PLSNGDPKKQRPDSFAL 523
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 29 EDASKEDQIEGLVNNVKWQ--MSSDRKAGPLKLLQGLIWK 142
+DA Q+EG+V +KW+ M+ ++ L +Q IW+
Sbjct: 778 DDAETIQQVEGMVKAMKWEVRMTYSKEKEGLLSVQKSIWR 817
>At4g33560.1 68417.m04769 expressed protein
Length = 95
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = -1
Query: 522 EAVASVDSGPLPSRLTSAACMPEERAASASLTISVRNKMSSVLQPIFSEIIV*LVLSCFG 343
EA+A V + +PSR P +S+S T S+R+K S P + + LSCFG
Sbjct: 39 EAMARVRTITVPSR-------PSPPTSSSSAT-SIRSKPLSTT-PFETSFEKAMGLSCFG 89
Query: 342 PTAV 331
PT V
Sbjct: 90 PTTV 93
>At4g03220.1 68417.m00441 F-box family protein ; similar to SKP1
interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 498
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 243 TLQGLFKPRSFSSVSQVLEISYRSSMDTSTLQSVR 347
++ L P+SFSS S +S RS D++ L+S+R
Sbjct: 70 SINDLKNPKSFSSNSIYKVLSLRSHRDSNNLRSLR 104
>At5g26230.1 68418.m03123 expressed protein predicted protein,
Arabidopsis thaliana
Length = 341
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 437 AEAARSSGMHAALVSREGNGPLSTEATASFPVLH 538
+ ++ S AA S E N ST++TASFP+LH
Sbjct: 79 SSSSSSVATSAARDSTESNS--STDSTASFPLLH 110
>At4g24610.1 68417.m03525 expressed protein
Length = 1145
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 161 EIKGHIYDDVSPALEQWRSTEGQKIYIYSSGSVQAQKLLFGQSSAGDLLPLIDGHFDTAV 340
+I+ H + + WR+ + + ++GS ++ L ++ L + G T V
Sbjct: 326 KIRIHFSNMSTRLFSGWRALRKIHVRVPANGSSLPRQSLAYVHASTQYLKQVSGLLKTGV 385
Query: 341 GP-KQESTSYTMISEKIGCK 397
+ STSY ++ E CK
Sbjct: 386 TSLRNNSTSYDIVQETYSCK 405
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,111,203
Number of Sequences: 28952
Number of extensions: 272366
Number of successful extensions: 802
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -