Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N08
         (244 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)                   27   1.8  
SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   1.8  
SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022)             27   3.1  
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)                 26   4.1  
SB_13297| Best HMM Match : RnaseH (HMM E-Value=0.37)                   26   5.4  
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.2  
SB_53389| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10)         25   9.5  
SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3)                  25   9.5  
SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)         25   9.5  
SB_30214| Best HMM Match : Exo_endo_phos (HMM E-Value=6.1e-11)         25   9.5  
SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11)                   25   9.5  
SB_23690| Best HMM Match : N6_N4_Mtase (HMM E-Value=0)                 25   9.5  
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)                       25   9.5  

>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
          Length = 1074

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 161 PTHSRSPILETSPTEDDPALVQAGTR-TASNSARRSKKLAILLK 33
           P     P L+T P ED P +  A    TA N A   K+ A  +K
Sbjct: 81  PAVEEKPSLDTKPAEDKPKIEAAKQEATADNKAEPKKEQASGIK 124


>SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 492

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 9/18 (50%), Positives = 16/18 (88%)
 Frame = +2

Query: 98  APGPDHLQLEKSLKLVTV 151
           +PGPDH+++E +LK++ V
Sbjct: 275 SPGPDHIKVETTLKILGV 292


>SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022)
          Length = 297

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 161 PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKK 51
           P+ S+  +LET   E +PA     +   + +A+RS K
Sbjct: 88  PSQSKDGVLETETKESNPAAENKRSNQKNANAKRSHK 124


>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
          Length = 312

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -3

Query: 179 CPFKP*P-THSRSPILETSPT-EDDPALVQAGT-RTASNSARRSK 54
           CP  P   THS SP ++T+P     PA +   T +T S+++  SK
Sbjct: 48  CPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSSTSSTSK 92


>SB_13297| Best HMM Match : RnaseH (HMM E-Value=0.37)
          Length = 393

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 75  RCSPRTCLHQGRIIFSWRS 131
           +CSPR C++  +++F  RS
Sbjct: 166 QCSPRLCINSKKMVFQGRS 184


>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 834

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -3

Query: 173 FKP*PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKKLAILLKMC 27
           +K  P H  SP+ ++SP     +L ++ +   S++  +S  L     +C
Sbjct: 704 YKSSPLHKSSPLYKSSPLYKSSSLYKSSSLYKSSALYKSSPLYKCSSLC 752


>SB_53389| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10)
          Length = 774

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 161 PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKK 51
           P+ S+   LET   E +PA     +   + +A+RS K
Sbjct: 46  PSQSKDGALETETKESNPAAENKRSNQKNANAKRSHK 82


>SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3)
          Length = 223

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 161 PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKK 51
           P+ S+   LET   E +PA     +   + +A+RS K
Sbjct: 88  PSQSKDGALETETKESNPAAENKRSNQKNANAKRSHK 124


>SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)
          Length = 851

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 161 PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKK 51
           P+ S+   LET   E +PA     +   + +A+RS K
Sbjct: 117 PSQSKDGALETETKESNPAAENKRSNQKNANAKRSHK 153


>SB_30214| Best HMM Match : Exo_endo_phos (HMM E-Value=6.1e-11)
          Length = 509

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 161 PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKK 51
           P+ S+   LET   E +PA     +   + +A+RS K
Sbjct: 58  PSQSKDGALETETKESNPAAENKRSNQKNANAKRSHK 94


>SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11)
          Length = 510

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 161 PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKK 51
           P+ S+   LET   E +PA     +   + +A+RS K
Sbjct: 251 PSQSKDGALETETKESNPAAENKRSNQKNANAKRSHK 287


>SB_23690| Best HMM Match : N6_N4_Mtase (HMM E-Value=0)
          Length = 297

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 106 AGSSSVGEVSKIGDREWVGYGLNGQPNYVDRADF 207
           AGS++ G+V++  DR+W+ + L  + +YV  + F
Sbjct: 224 AGSNTTGQVAEGLDRKWLAFEL--EQSYVAASCF 255


>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 1821

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 161 PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKK 51
           P+ S+   LET   E +PA     +   + +A+RS K
Sbjct: 251 PSQSKDGALETETKESNPAAENKRSNQKNANAKRSHK 287


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,006,730
Number of Sequences: 59808
Number of extensions: 132181
Number of successful extensions: 255
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 16,821,457
effective HSP length: 58
effective length of database: 13,352,593
effective search space used: 293757046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)