Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N08
         (244 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058491-1|AAL13720.1|  182|Drosophila melanogaster GM14452p pro...    55   1e-08
AE014134-3177|AAS64725.1|  182|Drosophila melanogaster CG10664-P...    55   1e-08
AE014134-3176|AAF53857.1|  182|Drosophila melanogaster CG10664-P...    55   1e-08
AY084105-1|AAL89843.1|  176|Drosophila melanogaster AT07685p pro...    46   7e-06
AE013599-72|AAF57334.2|  176|Drosophila melanogaster CG10396-PA ...    46   7e-06
AF367178-1|AAK31264.1|  747|Drosophila melanogaster chromatin as...    26   6.1  
AE013599-1108|AAF58788.1|  747|Drosophila melanogaster CG12892-P...    26   6.1  

>AY058491-1|AAL13720.1|  182|Drosophila melanogaster GM14452p
           protein.
          Length = 182

 Score = 55.2 bits (127), Expect = 1e-08
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +1

Query: 91  PACTRAGS-SSVGEVSKIGDREWVGYGLNGQPNYVDRADFPMPAIRFRADT 240
           P   + GS ++V  + KIG RE VGYG NG   Y DR D+P+PA+RFR  T
Sbjct: 19  PKSAQVGSVAAVHTLDKIGKREIVGYGWNGTACYADRVDYPLPAVRFREPT 69


>AE014134-3177|AAS64725.1|  182|Drosophila melanogaster CG10664-PB,
           isoform B protein.
          Length = 182

 Score = 55.2 bits (127), Expect = 1e-08
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +1

Query: 91  PACTRAGS-SSVGEVSKIGDREWVGYGLNGQPNYVDRADFPMPAIRFRADT 240
           P   + GS ++V  + KIG RE VGYG NG   Y DR D+P+PA+RFR  T
Sbjct: 19  PKSAQVGSVAAVHTLDKIGKREIVGYGWNGTACYADRVDYPLPAVRFREPT 69


>AE014134-3176|AAF53857.1|  182|Drosophila melanogaster CG10664-PA,
           isoform A protein.
          Length = 182

 Score = 55.2 bits (127), Expect = 1e-08
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +1

Query: 91  PACTRAGS-SSVGEVSKIGDREWVGYGLNGQPNYVDRADFPMPAIRFRADT 240
           P   + GS ++V  + KIG RE VGYG NG   Y DR D+P+PA+RFR  T
Sbjct: 19  PKSAQVGSVAAVHTLDKIGKREIVGYGWNGTACYADRVDYPLPAVRFREPT 69


>AY084105-1|AAL89843.1|  176|Drosophila melanogaster AT07685p
           protein.
          Length = 176

 Score = 46.0 bits (104), Expect = 7e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +1

Query: 103 RAGSSSVGEVSKIGDREWVGYGLNGQPNYVDRADFPMPAIRFRADTP 243
           R  S   G    + DR+ VG+G+NG+P Y D  D P PAIR+R  +P
Sbjct: 19  RFASGGDGIRLMVADRQVVGHGINGRPIYFDSPDCPFPAIRYREVSP 65


>AE013599-72|AAF57334.2|  176|Drosophila melanogaster CG10396-PA
           protein.
          Length = 176

 Score = 46.0 bits (104), Expect = 7e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +1

Query: 103 RAGSSSVGEVSKIGDREWVGYGLNGQPNYVDRADFPMPAIRFRADTP 243
           R  S   G    + DR+ VG+G+NG+P Y D  D P PAIR+R  +P
Sbjct: 19  RFASGGDGIRLMVADRQVVGHGINGRPIYFDSPDCPFPAIRYREVSP 65


>AF367178-1|AAK31264.1|  747|Drosophila melanogaster chromatin
           assembly factor-1 p105subunit protein.
          Length = 747

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 152 SRSPILETSPTEDDPALVQAGTRTASNS 69
           SR P+ ET  TE  PA+++A   T   +
Sbjct: 670 SRKPLPETVKTETKPAVIEASEATCERT 697


>AE013599-1108|AAF58788.1|  747|Drosophila melanogaster CG12892-PA
           protein.
          Length = 747

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 152 SRSPILETSPTEDDPALVQAGTRTASNS 69
           SR P+ ET  TE  PA+++A   T   +
Sbjct: 670 SRKPLPETVKTETKPAVIEASEATCERT 697


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,666,953
Number of Sequences: 53049
Number of extensions: 209681
Number of successful extensions: 455
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)