Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N08
(244 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g05120.1 68415.m00539 expressed protein 27 1.7
At4g08130.1 68417.m01337 hypothetical protein 25 5.3
At5g16440.1 68418.m01921 isopentenyl-diphosphate delta-isomerase... 25 7.0
At2g18770.1 68415.m02185 expressed protein 25 7.0
At1g73810.1 68414.m08546 expressed protein contains Pfam profile... 25 9.3
At1g71220.1 68414.m08219 UDP-glucose:glycoprotein glucosyltransf... 25 9.3
At1g66840.1 68414.m07597 expressed protein contains Pfam profile... 25 9.3
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi... 25 9.3
At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar... 25 9.3
At1g17210.1 68414.m02097 expressed protein distantly related to ... 25 9.3
>At2g05120.1 68415.m00539 expressed protein
Length = 1234
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 133 SKIGDREWVGYGLNGQPNYVDRADFPM 213
SK+ + E V Y LN Q Y+ RAD P+
Sbjct: 762 SKVSELEEVFYCLNRQLEYIIRADQPL 788
>At4g08130.1 68417.m01337 hypothetical protein
Length = 226
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 163 YGLNGQPNYVDRADFPMP 216
YG NGQPNY ++ F P
Sbjct: 47 YG-NGQPNYTHKSQFQQP 63
>At5g16440.1 68418.m01921 isopentenyl-diphosphate delta-isomerase I
/ isopentenyl diphosphate:dimethylallyl diphosphate
isomerase I (IPP1) identical to SP|Q38929
Length = 233
Score = 25.0 bits (52), Expect = 7.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 14 SKEKDTFSAIWPTSCCA 64
SK K TF +W +CC+
Sbjct: 73 SKTKVTFPLVWTNTCCS 89
>At2g18770.1 68415.m02185 expressed protein
Length = 260
Score = 25.0 bits (52), Expect = 7.0
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -2
Query: 237 VRTESNSRHGKVSPVNVVRLP 175
+ E+N++ GKV PV+++ +P
Sbjct: 97 LHNENNTKKGKVKPVHLIDVP 117
>At1g73810.1 68414.m08546 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 418
Score = 24.6 bits (51), Expect = 9.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 163 YGLNGQPNYVDRADFPMPAIRFR 231
Y +N Q +YVD D P PA R R
Sbjct: 253 YLINSQHSYVDVYDLPGPAGRGR 275
>At1g71220.1 68414.m08219 UDP-glucose:glycoprotein
glucosyltransferase, putative similar to
UDP-glucose:glycoprotein glucosyltransferase precursor
GB:Q09332 [SP|Q09332] from Drosophila melanogaster,
[gi:7670746] and [gi:11346464] from Homo sapiens
Length = 1673
Score = 24.6 bits (51), Expect = 9.3
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 152 SRSPILETSPTEDDP---ALVQAGTRTASNSARRSKKLAILLKMCLFLSK 12
+R +L +S DP ++ +TAS+ + + K L L K+CLF +
Sbjct: 815 ARLGVLFSSSQNADPHSLLFIKFFEKTASSFSHKEKVLYFLDKLCLFYER 864
>At1g66840.1 68414.m07597 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 607
Score = 24.6 bits (51), Expect = 9.3
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = -2
Query: 63 AQQEVGHIAENVSFSFEKL 7
A++ + ++A+N++ SFEKL
Sbjct: 350 AEERISYLADNLTTSFEKL 368
>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
to CREB-binding protein GB:AAC51770 GI:2443859 from
[Homo sapiens]; contains Pfam PF02135: TAZ zinc finger
profile; contains Pfam PF00569: Zinc finger, ZZ type
domain; identical to histone acetyltransferase HAC4
(GI:14794966) {Arabidopsis thaliana}
Length = 1456
Score = 24.6 bits (51), Expect = 9.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 219 SRHGKVSPVNVVRLPV*AIAHPFTVTNFRDFSN*R 115
S H + P+ LP + HP TNF+ N R
Sbjct: 317 SYHSNLQPMQQTPLPKRQLHHPLWNTNFQSAPNNR 351
>At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar to
gb|U06698 neuronal kinesin heavy chain from Homo sapiens
and contains a PF|00225 Kinesin motor domain. EST
gb|AA042507 comes from this gene; identical to cDNA
MKRP1 mRNA for kinesin-related protein, GI:16902291,
kinesin-related protein [Arabidopsis thaliana]
GI:16902292
Length = 890
Score = 24.6 bits (51), Expect = 9.3
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 173 FKP*PTHSRSPILETSPTEDDPALVQAGTRTASNSARRSKKLAI 42
F P S SP+L +SP+ + + T AS + + + I
Sbjct: 37 FSASPVTSSSPLLRSSPSPSTSSAAASSTAVASTKLKENITVTI 80
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 24.6 bits (51), Expect = 9.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 94 ACTRAGSSSVGEVSKIGDREWVGYGL 171
A + AG+SS + G +W G+GL
Sbjct: 49 AASSAGASSPAVLVNAGSVDWTGHGL 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,517,476
Number of Sequences: 28952
Number of extensions: 95328
Number of successful extensions: 205
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 12,070,560
effective HSP length: 59
effective length of database: 10,362,392
effective search space used: 217610232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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