Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N07
(438 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 243 5e-65
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 243 5e-65
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 243 5e-65
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 243 5e-65
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 144 3e-35
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 144 3e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 4e-34
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 130 4e-31
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 68 3e-12
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 68 3e-12
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 68 3e-12
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 67 5e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 67 5e-12
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 54 3e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 52 2e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 2e-06
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 40 8e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 29 0.060
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.1
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.1
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 29 1.1
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 29 1.1
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 29 1.1
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 29 1.1
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 3.4
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 6.0
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 27 6.0
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 6.0
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 7.9
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 7.9
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 27 7.9
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 243 bits (594), Expect = 5e-65
Identities = 112/114 (98%), Positives = 113/114 (99%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 276 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVL 114
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 243 bits (594), Expect = 5e-65
Identities = 112/114 (98%), Positives = 113/114 (99%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 276 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVL 114
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 243 bits (594), Expect = 5e-65
Identities = 112/114 (98%), Positives = 113/114 (99%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 276 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVL 114
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 243 bits (594), Expect = 5e-65
Identities = 112/114 (98%), Positives = 113/114 (99%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 276 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVL 114
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 144 bits (348), Expect = 3e-35
Identities = 64/111 (57%), Positives = 83/111 (74%)
Frame = +3
Query: 105 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 284
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 285 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAIL 277
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 144 bits (348), Expect = 3e-35
Identities = 64/111 (57%), Positives = 83/111 (74%)
Frame = +3
Query: 105 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 284
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 285 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAIL 295
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 4e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 276 DKLKAER 296
DKLK +
Sbjct: 61 DKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 130 bits (314), Expect = 4e-31
Identities = 58/113 (51%), Positives = 81/113 (71%)
Frame = +3
Query: 99 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 278
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 279 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVL 216
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 68.1 bits (159), Expect = 3e-12
Identities = 40/112 (35%), Positives = 57/112 (50%)
Frame = +3
Query: 102 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 281
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 282 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAIL 141
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 68.1 bits (159), Expect = 3e-12
Identities = 40/112 (35%), Positives = 57/112 (50%)
Frame = +3
Query: 102 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 281
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 282 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAIL 142
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 68.1 bits (159), Expect = 3e-12
Identities = 40/112 (35%), Positives = 57/112 (50%)
Frame = +3
Query: 102 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 281
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 282 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAIL 142
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 67.3 bits (157), Expect = 5e-12
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = +3
Query: 108 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 281
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 282 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVL 137
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 67.3 bits (157), Expect = 5e-12
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = +3
Query: 108 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 281
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 282 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVL 137
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 54.4 bits (125), Expect = 3e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDF 389
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 52.0 bits (119), Expect = 2e-07
Identities = 36/106 (33%), Positives = 49/106 (46%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
RGITI A + + IID PGH DF + D AVL
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVL 141
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.4 bits (110), Expect = 2e-06
Identities = 31/90 (34%), Positives = 42/90 (46%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDF 389
RGIT+ Y + +ID PGH DF
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 39.9 bits (89), Expect = 8e-04
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 272
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 273 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
L+K E +G T+++ K + + + +ID+PGH DF + D A++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALV 139
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 39.5 bits (88), Expect = 0.001
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 272
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 273 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
L+K E +G T+++ K + + + +ID+PGH DF + D A++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALV 139
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 35.5 bits (78), Expect = 0.017
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +3
Query: 102 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 278
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 279 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALL 112
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 35.5 bits (78), Expect = 0.017
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +3
Query: 102 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 278
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 279 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALL 112
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 29.5 bits (63), Expect(2) = 0.060
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 243 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 419
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 420 ADCAVL 437
AD VL
Sbjct: 228 ADIVVL 233
Score = 23.0 bits (47), Expect(2) = 0.060
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 123 IVVIGHVDSGKST 161
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.85
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 374 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 285
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 198 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 198 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 29.5 bits (63), Expect = 1.1
Identities = 25/106 (23%), Positives = 43/106 (40%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+ + I + Y + IID PGH +F M AD V+
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVV 230
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.5 bits (63), Expect = 1.1
Identities = 25/106 (23%), Positives = 43/106 (40%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+ + I + Y + IID PGH +F M AD V+
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVV 105
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 90 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 182
P K+ + + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 90 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 182
P K+ + + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 117 INIVVIGHVDSGKSTTT 167
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 117 INIVVIGHVDSGKSTTT 167
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 267 WVLDKLKAERERGITIDIALWKFETGKYYVTII 365
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +3
Query: 327 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQA 422
++ E G+ V IID+ G RDFI KN+ GT+ A
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGTADA 97
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 267 WVLDKLKAERERGITIDIALWKFETGKYYVTII 365
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 267 WVLDKLKAERERGITIDIALWKFETGKYYVTII 365
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 90 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 248
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 90 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 248
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 360 IIDAPGHRDFIKNMITGTSQADCAVL 437
IID PGH F G+S D A+L
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAIL 578
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 90 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 248
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 79 LLDSLFHFTKLFLQTLTTD 23
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 79 LLDSLFHFTKLFLQTLTTD 23
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 351 YVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+V+ +D PGH + M+ G + D A L
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFL 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,779,687
Number of Sequences: 27780
Number of extensions: 193438
Number of successful extensions: 682
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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