Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N07
(438 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 223 5e-59
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 223 5e-59
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 223 5e-59
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 223 5e-59
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 130 3e-31
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 113 5e-26
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 78 3e-15
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 72 1e-13
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 50 5e-07
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 50 5e-07
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 50 7e-07
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 47 5e-06
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 43 8e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 39 0.001
At5g13650.2 68418.m01585 elongation factor family protein contai... 38 0.003
At5g13650.1 68418.m01584 elongation factor family protein contai... 38 0.003
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 36 0.012
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 30 0.79
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 30 0.79
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 29 1.4
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 27 4.2
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 27 4.2
At3g56520.1 68416.m06285 no apical meristem (NAM) family protein... 27 4.2
At2g43370.1 68415.m05392 U1 small nuclear ribonucleoprotein 70 k... 27 5.5
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 27 5.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 27 5.5
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 27 5.5
At1g72600.1 68414.m08395 hydroxyproline-rich glycoprotein family... 27 5.5
At3g14080.2 68416.m01780 small nuclear ribonucleoprotein, putati... 27 7.3
At3g14080.1 68416.m01779 small nuclear ribonucleoprotein, putati... 27 7.3
At1g33890.1 68414.m04201 avirulence-responsive protein, putative... 27 7.3
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 27 7.3
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 223 bits (544), Expect = 5e-59
Identities = 104/114 (91%), Positives = 106/114 (92%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 276 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVL 114
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 223 bits (544), Expect = 5e-59
Identities = 104/114 (91%), Positives = 106/114 (92%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 276 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVL 114
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 223 bits (544), Expect = 5e-59
Identities = 104/114 (91%), Positives = 106/114 (92%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 276 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVL 114
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 223 bits (544), Expect = 5e-59
Identities = 104/114 (91%), Positives = 106/114 (92%)
Frame = +3
Query: 96 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 275
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 276 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVL 114
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 130 bits (315), Expect = 3e-31
Identities = 54/107 (50%), Positives = 81/107 (75%)
Frame = +3
Query: 117 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 296
+N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ ER
Sbjct: 240 LNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEER 299
Query: 297 ERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
ERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L
Sbjct: 300 ERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAIL 346
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 113 bits (272), Expect = 5e-26
Identities = 50/111 (45%), Positives = 77/111 (69%)
Frame = +3
Query: 105 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 284
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 285 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+ ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVL 208
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 77.8 bits (183), Expect = 3e-15
Identities = 43/115 (37%), Positives = 61/115 (53%)
Frame = +3
Query: 93 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 272
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116
Query: 273 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAIL 171
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 72.1 bits (169), Expect = 1e-13
Identities = 42/112 (37%), Positives = 58/112 (51%)
Frame = +3
Query: 102 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 281
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107
Query: 282 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
E++RGITI A ++ET K + +D PGH D++KNMITG +Q D +L
Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGIL 159
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 50.4 bits (115), Expect = 5e-07
Identities = 37/106 (34%), Positives = 51/106 (48%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+GITI A Y V IID PGH DF + D A+L
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAIL 162
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 50.4 bits (115), Expect = 5e-07
Identities = 37/106 (34%), Positives = 51/106 (48%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
+GITI A Y V IID PGH DF + D A+L
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAIL 162
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 50.0 bits (114), Expect = 7e-07
Identities = 33/94 (35%), Positives = 49/94 (52%)
Frame = +3
Query: 108 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 287
K + NI ++ H+D+GK+TTT ++Y G K E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYK---------IGEVHEGTATMDW----ME 140
Query: 288 AERERGITIDIALWKFETGKYYVTIIDAPGHRDF 389
E+ERGITI A K+ + IID PGH DF
Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDF 174
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 47.2 bits (107), Expect = 5e-06
Identities = 33/106 (31%), Positives = 49/106 (46%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
NI ++ HVD GK+T HLI GG + GK F +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
R IT+ + + Y + +ID+PGH DF + T +D A++
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALV 103
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 43.2 bits (97), Expect = 8e-05
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 300 RGITIDIAL----WKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
RGITI + + +E + + +ID PGH DF + + + A+L
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALL 181
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 39.1 bits (87), Expect = 0.001
Identities = 40/124 (32%), Positives = 53/124 (42%), Gaps = 9/124 (7%)
Frame = +3
Query: 93 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 272
K EK+ N +I H+D GKST L+ G I K G G +Y
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY--- 102
Query: 273 LDKLKAERERGITI---------DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQAD 425
LDKL +RERGIT+ + + E Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 426 CAVL 437
A+L
Sbjct: 161 GALL 164
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 37.9 bits (84), Expect = 0.003
Identities = 29/90 (32%), Positives = 40/90 (44%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDF 389
RGITI V IID PGH DF
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDF 159
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 37.9 bits (84), Expect = 0.003
Identities = 29/90 (32%), Positives = 40/90 (44%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 300 RGITIDIALWKFETGKYYVTIIDAPGHRDF 389
RGITI V IID PGH DF
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDF 158
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 35.9 bits (79), Expect = 0.012
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 287
N+ VI HVD GKST T L+ G I + + + A E +G + K + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 288 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
E ++ + +Y + +ID+PGH DF + D A++
Sbjct: 81 MTDE---SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALV 127
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 29.9 bits (64), Expect = 0.79
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 300 RGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
R I+I + L + Y I+D PGH +F M AD AVL
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVL 238
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 29.9 bits (64), Expect = 0.79
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 299
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 300 RGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 437
R I+I + L + Y I+D PGH +F M AD AVL
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVL 238
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 29.1 bits (62), Expect = 1.4
Identities = 30/113 (26%), Positives = 45/113 (39%)
Frame = +3
Query: 90 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAW 269
P++ + INI IGHV GKST ++ G+ T+ KF+ E + YA
Sbjct: 25 PEVISRQATINIGTIGHVAHGKST----IVKAVSGV--HTV-KFKSELERNITIKLGYA- 76
Query: 270 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADC 428
K + +A F +GK D GH + ++ S DC
Sbjct: 77 ---NAKIYKCEKCPRPVAYKSFGSGKEDNPSCDVSGHEKYKMKLLRHVSFVDC 126
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 27.5 bits (58), Expect = 4.2
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
Frame = +3
Query: 90 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 260
P++ + INI IGHV GKST ++ G+ R + E+ ++G + K
Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86
Query: 261 YAWVLDKLK---------AERERGITIDIALWKF--ETGKYYVTIIDAPGHRDFIKNMIT 407
Y DK + +E T D+ ++ T + +V+ +D PGH + M+
Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146
Query: 408 GTSQADCAVL 437
G + D A+L
Sbjct: 147 GAAIVDGALL 156
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 27.5 bits (58), Expect = 4.2
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
Frame = +3
Query: 90 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 260
P++ + INI IGHV GKST ++ G+ R + E+ ++G + K
Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86
Query: 261 YAWVLDKLK---------AERERGITIDIALWKF--ETGKYYVTIIDAPGHRDFIKNMIT 407
Y DK + +E T D+ ++ T + +V+ +D PGH + M+
Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146
Query: 408 GTSQADCAVL 437
G + D A+L
Sbjct: 147 GAAIVDGALL 156
>At3g56520.1 68416.m06285 no apical meristem (NAM) family protein
similar to nam-like protein 5 (GI:21105738 ) [Petunia x
hybrida]; hypothetical protein SENU5, senescence
up-regulated - Lycopersicon eculentum, PIR:T07182
Length = 175
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 255 RNPYPFPGLPSRTFRWYVCRYH-RICRSSDQLLWT 154
R+P+ PG PS +Y CR S+ LWT
Sbjct: 50 RHPHDLPGYPSEEHWYYFCRKRDNQVTSNSHNLWT 84
>At2g43370.1 68415.m05392 U1 small nuclear ribonucleoprotein 70 kDa,
putative
Length = 333
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 335 RNRQILCHHHRRSWTQRFH 391
R++ + HHHRRS++Q H
Sbjct: 312 RHKHLPSHHHRRSYSQDHH 330
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 360 IIDAPGHRDFIKNMITGTSQADCAVL 437
+ID PGH F G+S D A+L
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAIL 138
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 360 IIDAPGHRDFIKNMITGTSQADCAVL 437
+ID PGH F G+S D A+L
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAIL 797
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 360 IIDAPGHRDFIKNMITGTSQADCAVL 437
+ID PGH F G+S D A+L
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAIL 730
>At1g72600.1 68414.m08395 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 356 HHHRRSWTQRFHQEH 400
HH R+ W QR H +H
Sbjct: 70 HHRRKKWRQRRHHKH 84
>At3g14080.2 68416.m01780 small nuclear ribonucleoprotein, putative
/ snRNP, putative / Sm protein, putative similar to U6
snRNA-associated Sm-like protein LSm1 (Small nuclear
ribonuclear CaSm, Cancer-associated Sm-like) [Homo
sapiens] SWISS-PROT:O15116; contains Pfam profile:
PF01423 Sm protein
Length = 128
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 242
N+V+IG +D+ + H+I + + + +K E+EA E+
Sbjct: 75 NVVLIGELDTEREELPPHMI-RVSEAEIKRAQKVEREASEL 114
>At3g14080.1 68416.m01779 small nuclear ribonucleoprotein, putative
/ snRNP, putative / Sm protein, putative similar to U6
snRNA-associated Sm-like protein LSm1 (Small nuclear
ribonuclear CaSm, Cancer-associated Sm-like) [Homo
sapiens] SWISS-PROT:O15116; contains Pfam profile:
PF01423 Sm protein
Length = 128
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 120 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 242
N+V+IG +D+ + H+I + + + +K E+EA E+
Sbjct: 75 NVVLIGELDTEREELPPHMI-RVSEAEIKRAQKVEREASEL 114
>At1g33890.1 68414.m04201 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 334
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 81 NH*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYK 185
NH + K NIV++G +GKS T LI K
Sbjct: 2 NHSEQASAYKAVKNIVLVGRTGNGKSATGNSLIGK 36
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 354 VTIIDAPGHRDFIKNMITGTSQADCAVL 437
+ +ID PGH F G++ D A+L
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAIL 585
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,277,495
Number of Sequences: 28952
Number of extensions: 183663
Number of successful extensions: 644
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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