Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N06
(595 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21C3.07c |||actin binding methyltransferase |Schizosaccharom... 42 7e-05
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 38 0.001
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 36 0.004
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 34 0.018
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.031
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 31 0.13
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 31 0.13
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 29 0.51
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 27 2.1
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 27 2.7
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 26 3.6
SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 4.8
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 26 4.8
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 4.8
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 26 4.8
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 25 6.3
SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual 25 6.3
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 25 8.3
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 25 8.3
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 25 8.3
>SPBC21C3.07c |||actin binding methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 281
Score = 41.9 bits (94), Expect = 7e-05
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 5/168 (2%)
Frame = +3
Query: 96 DQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEG 275
++Y D + KF + Q + + L L + G K +L+ CG G ++ E
Sbjct: 80 ERYWDQFYGKNEGKFFMNRRWIAQEFPELLDLLKEDAGEKSILEIGCGAGNTIWPILKEN 139
Query: 276 FN----LVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFD 443
N + +VD S+K + ++NP YD + W+ D+ AS D
Sbjct: 140 KNSNLKIFAVDYSEKAIDVV-------KQNPLYDAKFCSASVWDLAGSDLLRSIEEASID 192
Query: 444 AVICLGNSFAHLLDEYEDQRIQKMCLKNFAKCLKPGGL-LFIDHRNYD 584
A+ + A D+++ ++N + LKPGGL LF D+ D
Sbjct: 193 AITLIFCFSALSPDQWQ------QAIENLYRLLKPGGLILFRDYGRLD 234
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 37.9 bits (84), Expect = 0.001
Identities = 36/123 (29%), Positives = 58/123 (47%)
Frame = +3
Query: 198 KKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVI 377
KK G +LD ACGTG+ S L +V +D S M+ ++ K PK +
Sbjct: 75 KKSGMS-ILDFACGTGLISQHLFPYCKQIVGIDVSQDMV-DVYNEKFRKMNIPK-ERACA 131
Query: 378 EEANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRIQKMCLKNFAKCLKPGGL 557
+ + L + + + FDAV+C ++ H+ D +Q++ K +K LKP G
Sbjct: 132 YVLSLDDLDGNGDEPF-STEFDAVVC-SMAYHHIKD------LQEVTNK-LSKLLKPNGR 182
Query: 558 LFI 566
LF+
Sbjct: 183 LFV 185
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 35.9 bits (79), Expect = 0.004
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 159 RTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFNLV-SVDASD 305
RT+ Y+DF+ K VLD CGTGI SM G V +VD SD
Sbjct: 239 RTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSD 288
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 33.9 bits (74), Expect = 0.018
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 177 DFLIGLLKKHGC---KKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALK 329
DF+ + ++ C KK+LD CG GI S + G ++ +VDAS ++ A K
Sbjct: 64 DFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGASVTAVDASPMAIEVAKK 117
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 33.1 bits (72), Expect = 0.031
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 192 LLKKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKAR 335
LL G +LD CG+GI + + +G +V +D S ML AL+++
Sbjct: 42 LLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQ 89
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 31.1 bits (67), Expect = 0.13
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 93 KDQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDE 272
KD Y D + ++ + + RT +Y+D ++ K VLD CGTGI SM
Sbjct: 16 KDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARA 75
Query: 273 GF-NLVSVDASD 305
G ++ VD S+
Sbjct: 76 GAKHVYGVDMSE 87
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 31.1 bits (67), Expect = 0.13
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 213 KKVLDGACGTGIDSMMLVDEGFNL-VSVDASDKMLKHALKARWEKRKNPKYDEWVIEEAN 389
++VL+ G GI L ++ +L V ++ +LKH K W R+N ++ E
Sbjct: 187 RRVLNVGFGLGIIDTFLQEKEPSLHVIIEPHPDVLKHMRKNGWMDRENV-----IVYETT 241
Query: 390 WETLPRDIENFY--HGASFDA 446
WE DI + Y G +DA
Sbjct: 242 WENAINDIASKYVFDGIYYDA 262
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 29.1 bits (62), Expect = 0.51
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 216 KVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHA 323
++LD CG G+ + LV + +V +DAS M+K A
Sbjct: 36 ELLDLGCGDGVLTNELVSQCRRVVGIDASPDMIKAA 71
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 346 LFSHLALSACFNILSEASTETRLKPSSTSIMESIP 242
L SH+ +A +ILS +ST +L PS +IP
Sbjct: 179 LRSHILFNALISILSSSSTLHKLYPSGLPYSVTIP 213
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/15 (73%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +3
Query: 372 VIEEA-NWETLPRDI 413
VI++A NWETLPRD+
Sbjct: 567 VIDKADNWETLPRDV 581
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 162 FFHYCLQ*ICSTLELPYRLHTDPLHPLKVY 73
FF++ L + TL+ Y H+D +HP V+
Sbjct: 202 FFNFLLNSVTETLDEYYGNHSDVMHPKWVH 231
>SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 301 EASTETRLKPSSTSIMESIPVPQA 230
++STE ++ P T I+ IPVP +
Sbjct: 215 KSSTELKIPPVETRIVAEIPVPSS 238
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 4.8
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 70 KVYLQRV*RISMQTVRQLERGTNSLETVMKEHKIIKTSSSGF*KNTDARKCWTVLAEQGL 249
K+ L+R + T +++ T + +E +I+ + G KNT ARK L + GL
Sbjct: 95 KLQLRR--ELDSLTAERVKNRTQEAQKEKEEKRIVTLQNDGGSKNTTARK-QKQLKKNGL 151
Query: 250 TP 255
P
Sbjct: 152 RP 153
>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 546
Score = 25.8 bits (54), Expect = 4.8
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -3
Query: 392 PISLF-----DYPFIIFWVFPLLPPGFERVLQHFVRSVN*NKIETFVYQHHGVNPCSAST 228
PIS+F YP I W+ P++ F V V+ N I YQH + +A+T
Sbjct: 427 PISMFWFAWTCYPHHIHWIVPIIASAFFGFSLLIVFFVSYNYI-IDSYQHMAPSALAAAT 485
Query: 227 VQHFLAS 207
+ + AS
Sbjct: 486 LVRYSAS 492
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 282 LVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLG 461
LV D ++ +K L + +R + YD +IE+ + ++ N + ++ G
Sbjct: 384 LVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEKVDSANSNKNATNDIKDLQTEEIVEEG 443
Query: 462 NS 467
NS
Sbjct: 444 NS 445
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 246 IDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENF 422
+D+M L D F +S D + +L+ L EKR K E V+ W T ++E+F
Sbjct: 233 LDAMTLFDV-FPTLSQDTYN-VLRACLCVSPEKRSLAKTREAVLAVTKWTTDDEELESF 289
>SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 300 SDKMLKHALKARWEKRKNPKYDEWVIEEANWETL 401
SD L+ ++A+W+ K+ +IE N +TL
Sbjct: 102 SDPQLQDGMQAKWDPTDVAKHISQIIERYNIKTL 135
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 397 VSQLASSITHSSYFGFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIPVPQAPSST 218
V QL +S+ +S G FL S + CF SE++ ++ + P A S+T
Sbjct: 122 VRQLHASLEDASSVGLFLLSLASERVCF---SESANSQEIESIDLGLGSQFGYPIASSNT 178
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -2
Query: 183 GSLYNFVFFHYCLQ*ICSTLELPYRLHTDPLHPLKVYLQISNEKLDPQTL 34
GS Y + + L+ C P +HTDP + + K++PQ +
Sbjct: 54 GSYYTTKIWSFSLK--CHLCSNPIDVHTDPKNTEYIVASGGRRKIEPQDI 101
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 503 PLIFVLVQEMGEGISKADDRIERSAMVKVLDVAR 402
PL V + EG++K +R++ M+ V+D+ +
Sbjct: 935 PLGLVFSEPTIEGLAKEIERMKSGEMISVMDIGK 968
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,603,423
Number of Sequences: 5004
Number of extensions: 57144
Number of successful extensions: 211
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -