Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N06
(595 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 39 0.003
01_06_0498 + 29810105-29810401,29811448-29812726,29813969-298142... 32 0.40
06_03_1200 - 28352647-28352712,28353097-28353216,28353314-283534... 31 0.69
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 31 0.92
01_06_0361 + 28733493-28733523,28733743-28733870,28733982-287340... 30 1.2
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 29 2.8
01_01_0868 - 6780919-6783207 29 2.8
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 29 3.7
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 28 4.9
05_03_0070 - 8023343-8023528,8023606-8023639,8024013-8024058,802... 28 4.9
04_03_0669 + 18531419-18531820,18532589-18532690,18532882-185329... 28 4.9
02_02_0129 + 7055896-7056135,7056404-7056771,7056816-7056928,705... 28 4.9
01_01_0867 - 6773411-6774682,6775008-6775643 28 4.9
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158... 28 6.5
08_02_1509 + 27611628-27611810,27611890-27612903,27612996-276139... 28 6.5
12_02_0338 - 17712076-17712261,17712339-17712431,17712533-177125... 27 8.5
11_01_0471 - 3648871-3649078,3649841-3649926,3650111-3650155,365... 27 8.5
05_03_0369 - 13136146-13136175,13136237-13136908,13136926-131370... 27 8.5
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 27 8.5
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 135 KFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFN-LVSVDASDKM 311
+ +GD RT+ Y+D L+G VLD CGTGI S+ G + +++VD S KM
Sbjct: 268 EMLGDK-VRTEAYRDALLGNPSLMNGATVLDVGCGTGILSLFAAKAGASRVIAVDGSAKM 326
Query: 312 LKHALKARWEKRKNPKYDE 368
+ A + K YDE
Sbjct: 327 VSVATEV--AKSNGFLYDE 343
>01_06_0498 +
29810105-29810401,29811448-29812726,29813969-29814204,
29814327-29814968
Length = 817
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 207 GCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHAL 326
G + D CGTG S+ + + ++V+ DAS+ ++HA+
Sbjct: 587 GHHRAWDAGCGTGQASISIAEHYDSVVATDASEGQIRHAV 626
>06_03_1200 -
28352647-28352712,28353097-28353216,28353314-28353466,
28354652-28354804,28354890-28354967
Length = 189
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 391 GKRYRATSRTFTMALRSMRSSALEIPSPISWTSTKISGYR 510
GK +SRT M L+S + W +TK++GYR
Sbjct: 94 GKALTTSSRTMVMMLQSKGYTPTNFAPGSRWVATKVTGYR 133
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 216 KVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHA 323
KV+D CG GI S L G + +DA DK +K A
Sbjct: 72 KVIDVGCGGGILSEPLARMGATVTGIDAVDKNIKIA 107
>01_06_0361 +
28733493-28733523,28733743-28733870,28733982-28734044,
28735074-28735211,28735357-28735494,28735700-28735843,
28736065-28736175,28736260-28736401,28736469-28736779,
28737057-28737218,28737313-28737366,28737472-28737546,
28737636-28737731
Length = 530
Score = 30.3 bits (65), Expect = 1.2
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = +3
Query: 174 KDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDE-GFNLVSVDASDKMLKHALKARWEKRK 350
K+F+ L K G + VLD CG G + D+ ++V +D S M+ AL+ ++
Sbjct: 312 KEFVDRLDLKPG-QNVLDVGCGIGGGDFYMADKYDVHVVGIDLSINMVSFALERAIGRKC 370
Query: 351 NPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRIQKMCLKNF 530
+ +++ + + +T P + +FD VI ++ H+ D+ K+F
Sbjct: 371 SVEFE---VADCTKKTYPDN--------TFD-VIYSRDTILHIQDK-------PSLFKSF 411
Query: 531 AKCLKPGGLLFI 566
K LKPGG + I
Sbjct: 412 FKWLKPGGKVLI 423
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 29.1 bits (62), Expect = 2.8
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = +3
Query: 159 RTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFNLV-SVDASDKMLKHALKAR 335
RT Y+ ++ K K V+D CGTGI S+ G V +V+AS+ A +AR
Sbjct: 67 RTDAYRSAIMHHQKFIEGKVVMDVGCGTGILSVFCARAGAKCVYAVEASEM----ATQAR 122
Query: 336 WEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRIQKM 515
+ N D+ V+ E + ++E+ D +I + L YE +
Sbjct: 123 EIVKANNLDDKVVVVHGRVEDV--EVED-----KVDVIISEWMGYMLL---YESMLPSVL 172
Query: 516 CLKNFAKCLKPGGLLFIDH 572
++ K LKPGGL+ H
Sbjct: 173 FARD--KWLKPGGLILPSH 189
>01_01_0868 - 6780919-6783207
Length = 762
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 515 HLLYPLIFVLVQEMGEGISKADDRIERSAMVKVLDVA 405
H +PL G+ + DDRIE +A +K LDVA
Sbjct: 670 HWYFPLYAAAKVNEGDVLCLLDDRIEGNASLKELDVA 706
>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 267 DEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWV 374
+EGFN+V D+ ++ + LK W WV
Sbjct: 1693 EEGFNVVVADSCQRVFVYGLKILWNLENRAAIVSWV 1728
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 28.3 bits (60), Expect = 4.9
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +3
Query: 219 VLDGACGTGIDSMMLVDEG-FNLVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWE 395
VLD CGTG+ S+ G + +VDASD AL+A R+N D+ ++ E
Sbjct: 85 VLDVGCGTGVLSIFCAFAGAARVYAVDASD----IALQAMEIVRENELSDKVIVLHGRIE 140
Query: 396 -TLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRIQKMCLKNFAKCLKPGGLLFIDH 572
R EN + + ++L YE + ++ K LKPGGL+ H
Sbjct: 141 YYYIRIFENQDVEIEEKVDVIISEWMGYML-LYESMLGSVIFARD--KWLKPGGLILPSH 197
>05_03_0070 -
8023343-8023528,8023606-8023639,8024013-8024058,
8024139-8024389,8024473-8026001,8026128-8026496,
8026582-8026821
Length = 884
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 366 EWVIEEANWETLPRDIENFYHGAS 437
EW +EEA WE R + NFY AS
Sbjct: 644 EWALEEAPWEM--RRLHNFYMEAS 665
>04_03_0669 +
18531419-18531820,18532589-18532690,18532882-18532948,
18533530-18533708,18533792-18534052,18535324-18535407,
18535517-18535564,18535654-18535718,18536849-18536897,
18538132-18538372,18539623-18539744,18539942-18540022,
18540094-18540168,18540408-18540550,18540662-18540812,
18540915-18541097
Length = 750
Score = 28.3 bits (60), Expect = 4.9
Identities = 45/171 (26%), Positives = 64/171 (37%), Gaps = 16/171 (9%)
Frame = +3
Query: 90 VKDQYADGKAARAWNKFI-----GDSNERTQNYKDFLIGLLKK-HG---------CKKVL 224
+ D D + W+KF GDS E + D LL HG ++L
Sbjct: 19 ILDTLGDFTSRENWDKFFALRGTGDSFEWYAEWDDLRAPLLSLLHGGGGAEGGGKAPEIL 78
Query: 225 DGACGTGIDSMMLVDEGFNLV-SVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETL 401
CG+ + S L D GF V +VD S ++ L R R P E W +
Sbjct: 79 VPGCGSSVLSERLYDAGFRRVTNVDFSRVLVADML--RRHARARP--------EMRWRVM 128
Query: 402 PRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRIQKMCLKNFAKCLKPGG 554
F G SFD ++ G A L++ ++ L + LK GG
Sbjct: 129 DMTDMQFTDG-SFDVILDKGGLDA-LMEPEAGTKLGMKYLNEAKRVLKSGG 177
>02_02_0129 +
7055896-7056135,7056404-7056771,7056816-7056928,
7057014-7057118,7057283-7057860,7057889-7058346,
7058430-7058681,7058762-7058872,7058960-7059020,
7059122-7059214,7059292-7059477
Length = 854
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 366 EWVIEEANWETLPRDIENFYHGAS 437
EW +EEA WE R + NFY AS
Sbjct: 552 EWALEEAPWEM--RRLHNFYMEAS 573
>01_01_0867 - 6773411-6774682,6775008-6775643
Length = 635
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 515 HLLYPLIFVLVQEMGEGISKADDRIERSAMVKVLDVA 405
H +PL G+ + DDR+E +A +K LDVA
Sbjct: 543 HRYFPLYAAAKVNEGDVLCLLDDRLEGNASLKELDVA 579
>09_01_0102 +
1582793-1582898,1582988-1583093,1584115-1584172,
1584676-1584745,1585132-1585197,1586374-1586429,
1587992-1588078,1588819-1589139,1589827-1589946,
1590747-1590881,1591529-1591605,1591681-1591756,
1592800-1592874,1592971-1593075,1593299-1593374,
1594482-1594617,1594702-1594804,1595186-1595298,
1596907-1597111,1597173-1597301,1597403-1597517,
1597710-1597795,1599108-1599203,1599615-1599751,
1600374-1600476,1601809-1601888,1602013-1602091,
1602241-1602298,1602489-1602586,1602673-1602767,
1602861-1602918
Length = 1074
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 135 KFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEG 275
K + D N+R YK+F+ G+ ++ G VL+ D + ++G
Sbjct: 762 KALQDENDRRACYKEFIDGVYREVGPSNVLEKEIERVKDKLQTAEQG 808
>08_02_1509 +
27611628-27611810,27611890-27612903,27612996-27613978,
27614079-27614352
Length = 817
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 251 VNPCSASTVQHFLASVFFQKPDEEVFIILCS 159
++PCS V H +A+VFF D+ + L S
Sbjct: 645 LHPCSDRAVTHVVAAVFFGGADDREAVSLAS 675
>12_02_0338 -
17712076-17712261,17712339-17712431,17712533-17712593,
17712681-17712791,17712872-17713123,17713207-17714543,
17714649-17715317,17715403-17715642
Length = 982
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 366 EWVIEEANWETLPRDIENFYHGAS 437
EW +EEA WE R + NFY AS
Sbjct: 680 EWALEEAPWEM--RRLYNFYMEAS 701
>11_01_0471 -
3648871-3649078,3649841-3649926,3650111-3650155,
3650306-3650815,3651700-3653757
Length = 968
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 360 ILGFSSSPTWL*ARASTFCQKRQLKQD*NLRL 265
++ SS+PT + A A+T+CQ + D N++L
Sbjct: 268 LVSLSSAPTAVRAAANTYCQLLSSQSDNNVKL 299
>05_03_0369 -
13136146-13136175,13136237-13136908,13136926-13137016,
13137184-13137416,13137459-13137731,13137877-13138265,
13138325-13139156,13139847-13139922,13140027-13140414,
13141395-13141748,13142069-13142333,13143366-13143716
Length = 1317
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 260 HHGVNPCSASTVQHFLAS 207
HHG NP +A+T +F AS
Sbjct: 410 HHGTNPTTAATTTNFTAS 427
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 395 NVTARHRELLPWRFVRCGHLPWK 463
N+T HREL+P R +R L W+
Sbjct: 939 NLTLEHRELIPNRALRSAILEWQ 961
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 371 GNRRG*LGNVTARHRELLPWRFVRCGHLPWK 463
GN R + N++ +REL P R +R L W+
Sbjct: 1959 GNARSPMTNLSLENRELTPNRVLRSAILEWR 1989
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,501,533
Number of Sequences: 37544
Number of extensions: 356790
Number of successful extensions: 1086
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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