Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N06
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical p... 36 0.029
U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical pr... 34 0.088
AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical ... 33 0.20
AL132949-36|CAJ58501.1| 311|Caenorhabditis elegans Hypothetical... 31 0.47
Z73906-4|CAA98117.1| 508|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z74031-8|CAA98451.1| 372|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical pr... 29 1.9
U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical pr... 29 1.9
U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying defe... 29 1.9
U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying defe... 29 1.9
AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain pr... 29 1.9
AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical ... 29 1.9
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 25 2.7
AF024494-10|AAB70336.1| 642|Caenorhabditis elegans Hypothetical... 29 3.3
L14429-7|AAK93871.1| 285|Caenorhabditis elegans Coenzyme q (ubi... 28 5.8
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 28 5.8
>Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical
protein C25A1.3 protein.
Length = 380
Score = 35.5 bits (78), Expect = 0.029
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +3
Query: 216 KVLDGACGTGIDSMMLVDEGF-NLVSVDASDKMLKHA---LKARWEKRKNPKYD-EWVIE 380
+VLD ACG G D G ++V D +D ++ A K + +KN + ++++
Sbjct: 57 RVLDLACGKGGDLKKWDIAGAKDVVMADVADVSIQQAEERYKQMFGYKKNNIFTVQFIVA 116
Query: 381 EANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRIQKMCLKNFAKCLKPGGL 557
+ E L IEN FD V C FA L + D+ ++ LKN LKPGG+
Sbjct: 117 DCTKENLEDRIEN---KDPFDLVSC---QFA-LHYSFVDEASARIFLKNAVGMLKPGGV 168
>U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical
protein C27F2.4 protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.088
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 219 VLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHA 323
+LD CGTG+ S +++D G V VD S ML+ A
Sbjct: 57 LLDIGCGTGMSSEVILDAGHMFVGVDVSRPMLEIA 91
>AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical
protein Y47H9B.2 protein.
Length = 317
Score = 32.7 bits (71), Expect = 0.20
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -1
Query: 388 LASSITHSSYFGFFLFS---HLALSACFNILSEASTETRLKPSSTSIMESIPVPQAPSST 218
LA++I Y ++ S + AL I SEAST T ++PS+ S E P+ PS++
Sbjct: 242 LAATIGSRKYPWYYKMSSAMYPALCELAGICSEASTTTTVQPSTASTAEPTDSPEPPSTS 301
>AL132949-36|CAJ58501.1| 311|Caenorhabditis elegans Hypothetical
protein Y53F4B.42 protein.
Length = 311
Score = 31.5 bits (68), Expect = 0.47
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 7/170 (4%)
Frame = +3
Query: 96 DQYADGKAARAWNKFIGDSNERTQNYKDFLI---GLLKKHGCKKVLDGACGTGIDSMMLV 266
DQ+ D A N+F D N + + + + L+K + +L+ CG G + L+
Sbjct: 79 DQW-DAFYAHNENRFFKDRNWLLKEFPELNVEDESNLQKEKIE-ILEVGCGVGNTTFPLL 136
Query: 267 DEGFNLVSVDASDKMLK---HALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGAS 437
V+ +S ML +A A + YD + W+ + + S
Sbjct: 137 Q-----VNNSSSRLMLHSCDYAPNAIRVLKSQDAYDPEKMNAFVWDITQPASQEAPNVGS 191
Query: 438 FDAVICLGNSFAHLLDEYEDQRIQKMCLKNFAKCLKPGG-LLFIDHRNYD 584
D ++C+ ++L I K LKN + LKPGG LL D+ YD
Sbjct: 192 LDYIVCI-----YVLSAIHPDNI-KNALKNLVRLLKPGGSLLLKDYGRYD 235
>Z73906-4|CAA98117.1| 508|Caenorhabditis elegans Hypothetical
protein D2030.3 protein.
Length = 508
Score = 31.1 bits (67), Expect = 0.62
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 251 VNPCSASTVQHFLASVFFQKPDEEVFI-ILCSFITVSNEFVP 129
+ P +TVQ + PD +++ +L +F+T++NE+VP
Sbjct: 314 IKPEVFATVQKAVCESAIMHPDSSIYLQLLAAFLTLNNEYVP 355
>Z74031-8|CAA98451.1| 372|Caenorhabditis elegans Hypothetical
protein F32D8.8 protein.
Length = 372
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 414 ENFYHGASFDAVICLG-NSFAHLLDEYEDQR-IQKMCLKNFAKC-LKPGGLLFI 566
E+F A+F ++ +G + +D Y D R IQK+ +C LKPGGLLF+
Sbjct: 258 ESFDFAAAFSSIEYIGLGQYGEPIDPYGDLREIQKI------RCALKPGGLLFL 305
>Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 251 VNPCSASTVQHFLASVFFQKPDEEVFIILCSFITVSNEFVPRSSCLTVCILILYT 87
V P ++S + S+F+Q+ + II SF+T FV C + +L+L T
Sbjct: 81 VVPMASSLILGPFCSIFYQRSGARISIIAGSFLT-GGSFVVGPFCKNIYLLMLAT 134
>Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 251 VNPCSASTVQHFLASVFFQKPDEEVFIILCSFITVSNEFVPRSSCLTVCILILYT 87
V P ++S + S+F+Q+ + II SF+T FV C + +L+L T
Sbjct: 81 VVPMASSLILGPFCSIFYQRSGARISIIAGSFLT-GGSFVVGPFCKNIYLLMLAT 134
>U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical
protein R08E5.3 protein.
Length = 365
Score = 29.5 bits (63), Expect = 1.9
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Frame = +3
Query: 207 GCKKVLDGACGTGIDSMMLVDE--GFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVIE 380
G +VLD CG G S +L ++ + V +D + ++ A K R + + ++
Sbjct: 175 GGVRVLDVGCGGGFHSSLLAEQYPKSHFVGLDIGEDAIRQA-KQR-KTKSGAAFNNLEFI 232
Query: 381 EANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRIQKMCLKNFAKCLKPGGL 557
E + +P + SFD V+ + D DQR +C++ + LKP G+
Sbjct: 233 ECDAGKMPEIWTD-----SFDLVL--------IFDACHDQRRPDLCVQEIHRVLKPSGM 278
>U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying
defective protein 13,isoform c protein.
Length = 422
Score = 29.5 bits (63), Expect = 1.9
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 150 SNERTQNYKDFLIGLLK-KHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHAL 326
S T DF L + +HGC ++DG I + + +G + D ++ ++
Sbjct: 28 STSATTGISDFPDILAQTEHGCSVLIDGNHLREIINSVDTQDGKQDLLSDVIRQLT--SI 85
Query: 327 KARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRI 506
K R ++P D+ ++E P D+ H +FD+ + L H L +++ Q+
Sbjct: 86 KERLTNDESPVKDD--LKED-----PDDMSPMLHAGNFDSEMLLRQ---HELMQHQQQQ- 134
Query: 507 QKMCLKNFAKCLKPGGLLFIDHRNYDALI 593
M + N K + LLF NY+A++
Sbjct: 135 --MIIANMLKATQSLPLLFNGGLNYEAIL 161
>U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying
defective protein 13,isoform a protein.
Length = 470
Score = 29.5 bits (63), Expect = 1.9
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 150 SNERTQNYKDFLIGLLK-KHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHAL 326
S T DF L + +HGC ++DG I + + +G + D ++ ++
Sbjct: 76 STSATTGISDFPDILAQTEHGCSVLIDGNHLREIINSVDTQDGKQDLLSDVIRQLT--SI 133
Query: 327 KARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRI 506
K R ++P D+ ++E P D+ H +FD+ + L H L +++ Q+
Sbjct: 134 KERLTNDESPVKDD--LKED-----PDDMSPMLHAGNFDSEMLLRQ---HELMQHQQQQ- 182
Query: 507 QKMCLKNFAKCLKPGGLLFIDHRNYDALI 593
M + N K + LLF NY+A++
Sbjct: 183 --MIIANMLKATQSLPLLFNGGLNYEAIL 209
>AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain
protein COG-2 protein.
Length = 470
Score = 29.5 bits (63), Expect = 1.9
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 150 SNERTQNYKDFLIGLLK-KHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHAL 326
S T DF L + +HGC ++DG I + + +G + D ++ ++
Sbjct: 76 STSATTGISDFPDILAQTEHGCSVLIDGNHLREIINSVDTQDGKQDLLSDVIRQLT--SI 133
Query: 327 KARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRI 506
K R ++P D+ ++E P D+ H +FD+ + L H L +++ Q+
Sbjct: 134 KERLTNDESPVKDD--LKED-----PDDMSPMLHAGNFDSEMLLRQ---HELMQHQQQQ- 182
Query: 507 QKMCLKNFAKCLKPGGLLFIDHRNYDALI 593
M + N K + LLF NY+A++
Sbjct: 183 --MIIANMLKATQSLPLLFNGGLNYEAIL 209
>AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical
protein R08F11.4 protein.
Length = 354
Score = 29.5 bits (63), Expect = 1.9
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Frame = +3
Query: 216 KVLDGACGTGIDSMMLVDE--GFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEAN 389
+VLD CG G S +L + V +D ++K +K A + + + E+V+ +A
Sbjct: 168 RVLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAIKAARLKKKSDGTDFENLEFVVADA- 226
Query: 390 WETLPRDIENFYHGASFDAVICLGNSFAHLLDEYEDQRIQKMCLKNFAKCLKPGGLLFI 566
+P + SFD VI G+ DQ +CL + +KP GL+ +
Sbjct: 227 -AIMPSSWTD-----SFDLVILFGSC--------HDQMRPDLCLLEVHRVVKPDGLVAV 271
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -1
Query: 304 SEASTETRLKPSSTSIMESIPVPQAPSSTFLHPCFFKSPMRKSL 173
S AS+ + KP I + +PVP P + P R+ L
Sbjct: 118 SYASSVQQQKPPPVPIKQQVPVPSVPVIESIEQIPLPRPQREPL 161
Score = 22.2 bits (45), Expect(2) = 2.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 508 CIR*SSYSSKRWAKEFPRQMTASNEAPW 425
CIR + ++R+ + R+ T N AP+
Sbjct: 53 CIRATPILNQRFGPHYNRRFTQPNGAPY 80
>AF024494-10|AAB70336.1| 642|Caenorhabditis elegans Hypothetical
protein C38C3.7 protein.
Length = 642
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/83 (22%), Positives = 35/83 (42%)
Frame = +3
Query: 312 LKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLGNSFAHLLDEY 491
+K + + K + DE+V +E E RD++ + + +F H + +
Sbjct: 431 MKDEFQDHFSKEHYVEKDEFVQDETYLEIAKRDLKLIVGNRNLEI-----KNFKHHIWDM 485
Query: 492 EDQRIQKMCLKNFAKCLKPGGLL 560
ED +K C+ + LKP L
Sbjct: 486 EDVEFRKKCMDDMDDILKPAQFL 508
>L14429-7|AAK93871.1| 285|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 5 protein.
Length = 285
Score = 27.9 bits (59), Expect = 5.8
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 171 YKDFLIGLLKKHGCKKVLDGACGTG-IDSMMLVDEGFNLVSVDASDKMLKHALKARWEKR 347
+KD+ +G L+ K LD A GTG I +L V+V ++ + K R EK
Sbjct: 83 WKDYYVGGLQVPYNAKCLDMAGGTGDIAFRILRHSPTAKVTVSDINQPMLDVGKKRAEKE 142
Query: 348 KN--PKYDEWVIEEANWETLP 404
++ P EWV AN E +P
Sbjct: 143 RDIQPSRAEWVC--ANAEQMP 161
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 213 KKVLDGACGTGIDSMMLVDEGF-NLVSVDASDKMLKH 320
KKVLD CG G++S + G +V D S +M+++
Sbjct: 39 KKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIEN 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,256,604
Number of Sequences: 27780
Number of extensions: 314490
Number of successful extensions: 1069
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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