Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N04
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    77   1e-14
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    71   6e-13
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    36   0.022
AF039716-9|AAB96734.2|  548|Caenorhabditis elegans Hypothetical ...    30   1.1  
U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AL031620-5|CAA20926.1|  277|Caenorhabditis elegans Hypothetical ...    29   3.4  
U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF003130-3|AAB54123.1|  849|Caenorhabditis elegans Hypothetical ...    28   4.5  
AL023835-9|CAA19493.2|  397|Caenorhabditis elegans Hypothetical ...    28   5.9  
AC006769-16|AAF60588.2|  338|Caenorhabditis elegans Serpentine r...    27   7.8  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +2

Query: 32  GGSLIHPSAVLSAAHYVA---KVPKLRVRAGEWDTQST---KEIYPYQDREVESVAIHKD 193
           G S++  + +++AAH      +V    V  G+WD   T   ++I+  Q   +    ++KD
Sbjct: 55  GASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQ--RIHFYPLYKD 112

Query: 194 FDSVTMFYDISILFLKSP-MEMTPNVGVVCLPLKDEPAMPGTRCIAMGWGKDKFGKEGRH 370
             S    +DI+IL +  P +E       +CLP KD    PG +C+  GWG        R+
Sbjct: 113 IFS----HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGL----RY 164

Query: 371 QTILKKVEVPVVNRNTCMNKLQTTILGSLFYLHESFMCAGG-EPGKDTCKGDGGSPLVCP 547
              L+   +P++NR  C+N  Q  I  S   +  S  CAG  E G D+C+GD G P  C 
Sbjct: 165 AERLQAALIPIINRFDCVNSSQ--IYSS---MSRSAFCAGYLEGGIDSCQGDSGGPFACR 219

Query: 548 ME 553
            E
Sbjct: 220 RE 221


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 70.9 bits (166), Expect = 6e-13
 Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
 Frame = +2

Query: 32  GGSLIHPSAVLSAAHYVAK---VPKLRVRAGEWDTQSTKEIYPYQDREVESVAIHKDFD- 199
           GGSLI P+ VL+AAH  AK        VR G   + S     P++   V +V+IH  ++ 
Sbjct: 85  GGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGGHRSGSGS---PHR---VTAVSIHPWYNI 138

Query: 200 SVTMFYDISILFLKSPMEMTPNVGVVCLPLKDEPAMPGTRCIAMGWGKDKFGKEGRHQTI 379
                YD +I+ +  P+  +     +CLP    PA+    C+  GWG    G      T 
Sbjct: 139 GFPSSYDFAIMRIHPPVNTSTTARPICLP--SLPAVENRLCVVTGWGSTIEGSSLSAPT- 195

Query: 380 LKKVEVPVVNRNTCMNKLQTTILGSLFYLHESFMCAGGEPGK-DTCKGDGGSPLVC 544
           L+++ VP+++   C +      +G +     S +CAG   GK D+C+GD G PL+C
Sbjct: 196 LREIHVPLLSTLFCSS--LPNYIGRIHL--PSMLCAGYSYGKIDSCQGDSGGPLMC 247


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 35.9 bits (79), Expect = 0.022
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
 Frame = +2

Query: 218 DISILFLKSPMEMTPNVGVVCLP-LKDEPAMPGTRCIAMGWGKDKF-GKEGRHQTILKKV 391
           DI IL L+S ++        CLP L +     G    + GWG D   G +     +++ +
Sbjct: 177 DIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQVL 236

Query: 392 EVPVVNRNTCMNKLQTTILGSLFYLHESFMCAGGEPGKDTCKGDGGSPL 538
            +      TC     T+I        +SF C   E  K+ C GD G  L
Sbjct: 237 TLATETLATCEENWGTSIP------FDSF-CTAEEEDKNVCSGDSGGGL 278


>AF039716-9|AAB96734.2|  548|Caenorhabditis elegans Hypothetical
           protein W03G9.7 protein.
          Length = 548

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +2

Query: 113 GEWDTQSTKEIYPYQDREVESVAIHKDFDSVTMFYDISILFLKSPMEMTPNVGVV 277
           G+WD +  KE   Y+D  V    + K+ +   + YD ++   +   + T N+  +
Sbjct: 151 GQWDDRYLKEKAEYEDAMVRQETVQKELNIARVNYDNAVKIQEIYKQQTDNLNAL 205


>U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical
           protein F48E3.4 protein.
          Length = 279

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 512 CKGDGGSPLVCPMEYEDNRYVQ 577
           C  D G+PL C ++ E+N+YVQ
Sbjct: 197 CWDDIGAPLECVLDVENNKYVQ 218


>AL031620-5|CAA20926.1|  277|Caenorhabditis elegans Hypothetical
           protein C18B12.5 protein.
          Length = 277

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
 Frame = -2

Query: 97  LRDFCNVMRRAKNSAGM----YQGSTTDVYFNF 11
           + DFCN+++ +KN  G+    +QG+  DV+  F
Sbjct: 73  INDFCNMVKSSKNCLGIIDLDFQGANPDVHDKF 105


>U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical
           protein B0286.6 protein.
          Length = 279

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +2

Query: 212 FYDISILFLKSPMEMTPNVGVVCLPLKDE-PAMPGTRCIAMGWGKD 346
           F DI++  L+ P+E + ++   CLP   + P +  T     G+G+D
Sbjct: 120 FNDIAVFELEEPIEFSKDIFPACLPSAPKIPRIRETGYKLFGYGRD 165


>AF003130-3|AAB54123.1|  849|Caenorhabditis elegans Hypothetical
           protein F55A12.5 protein.
          Length = 849

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
 Frame = +2

Query: 125 TQSTKEIYPYQDREVESVAIHKDFDSVTMFYDISILFLKSPMEMTPNVGVVCLPLKDEPA 304
           T S KE +   D + E   +          ++ SIL  K+P ++ P V     P+KD   
Sbjct: 578 TPSKKESFDSSDEDEEDDEMEAALLKSAQRHEKSILAQKTPEKLAPKVAT---PMKDAQT 634

Query: 305 MPGTRCIAMGWGKDKFGKEGRHQTI-LKKVEVPVVN 409
                 ++ G       K      +  KKVE+PV++
Sbjct: 635 ETDDAVLSSGESSVVTVKYTPKMDVQKKKVEIPVIS 670


>AL023835-9|CAA19493.2|  397|Caenorhabditis elegans Hypothetical
           protein Y37A1B.10 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 601 IPQVTIPFLYVAVVLVLHRTDQGRTSVS 518
           IP VT+PFL + ++  LH   + R  ++
Sbjct: 247 IPAVTLPFLTIGLIKCLHEASRARQKLN 274


>AC006769-16|AAF60588.2|  338|Caenorhabditis elegans Serpentine
           receptor, class j protein20 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 366 RPSFPNLSFPQPMAMQRVPGIAGSSFRGRQTTPTFGVISIG-LFRNRMLMS*NIV 205
           R +F  L    P A+   P  A  +FR    + T+G++++  +FR   L S NI+
Sbjct: 69  RYAFVTLVVDGPFALSSEPAEAFIAFRASFLSGTYGILNVHFIFRYLALKSNNII 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,539,376
Number of Sequences: 27780
Number of extensions: 409656
Number of successful extensions: 1329
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)