SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_N02
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    26   0.26 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.6  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 408 VFNSEVQNLNFGKNEEAANIINTWVEDHTNK-RIKNLVDPSSLDSSTQCVL-VNAIYFK 578
           VF S    L F   +E  + +  ++EDHT +  +K  +   S+D  + C   +N   F+
Sbjct: 133 VFTSGKMKLMFPLMQECVDDLRRFLEDHTEEIDVKTAMKKYSVDIISTCAFGINTYCFR 191


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 164 HTLIWVFLDDFI 129
           HT IWVF D F+
Sbjct: 223 HTFIWVFNDVFV 234


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 164 HTLIWVFLDDFI 129
           HT IWVF D F+
Sbjct: 223 HTFIWVFNDVFV 234


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 164 HTLIWVFLDDFI 129
           HT IWVF D F+
Sbjct: 223 HTFIWVFNDVFV 234


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 229 DSPVEAIASWANG 191
           D   EA+A WANG
Sbjct: 334 DKNAEALAKWANG 346


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 240 LLKAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLANK 350
           LLK   F  DN+ K +     + ++++ G ++K   K
Sbjct: 115 LLKHNLFLLDNIVKPIIAFYYKPIKTLNGHEIKFIRK 151


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 149 VFLDDFIKHTCGELIISILEYSL 81
           + L D + HT GEL+ ++  YSL
Sbjct: 250 ILLCDSVAHTAGELLGAV--YSL 270


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 149 VFLDDFIKHTCGELIISILEYSL 81
           + L D + HT GEL+ ++  YSL
Sbjct: 250 ILLCDSVAHTAGELLGAV--YSL 270


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 149 VFLDDFIKHTCGELIISILEYSL 81
           + L D + HT GEL+ ++  YSL
Sbjct: 570 ILLCDSVAHTAGELLGAV--YSL 590


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 170 QYHTLIWVFLDDFIKHTCGEL 108
           Q H ++ + L + I +TCGE+
Sbjct: 54  QKHLILLMVLVNLIFNTCGEV 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,587
Number of Sequences: 336
Number of extensions: 3322
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -