Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N02
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 78 8e-15
01_01_1152 + 9170628-9171899 77 2e-14
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 76 2e-14
11_02_0011 - 7337618-7338496,7338596-7338991 73 3e-13
04_04_0619 + 26652923-26653267,26653440-26654273 70 2e-12
11_02_0012 - 7346282-7347136,7347234-7347593 67 1e-11
11_01_0750 - 6315126-6315896,6316371-6316784 66 2e-11
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 65 4e-11
11_02_0014 - 7352619-7352918,7353173-7353418 59 3e-09
11_01_0771 + 6453130-6454488 57 2e-08
11_01_0767 + 6438648-6438809,6439146-6440000 56 4e-08
05_06_0044 - 25150322-25151260 46 3e-05
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 37 0.013
06_03_0551 - 22027441-22028224,22029015-22029344,22029510-220297... 29 3.5
04_03_0260 - 13580396-13582990 28 6.2
04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665... 28 6.2
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157... 28 6.2
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 8.1
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 77.8 bits (183), Expect = 8e-15
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Frame = +3
Query: 153 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--------DNVTKAVFTDLNQK 308
DK++ +S S+ LA L + GE+ D+++ + +V D +
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 309 VRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVE 485
G ++ AN V++ L +A V D + +E + ++F K EEA IN W E
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 486 DHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPT 665
T RIK+ + ++D +T VL NA+YFKG W+ KFD T D F++ + P
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPF 210
Query: 666 M 668
M
Sbjct: 211 M 211
>01_01_1152 + 9170628-9171899
Length = 423
Score = 76.6 bits (180), Expect = 2e-14
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Frame = +3
Query: 156 KSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN-DNVTKAVFTDLNQKVRSIKGVD 332
++ I+S S LA +A + GE+ ELL + P+ + ++ T L ++R +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 333 LKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHTNKRIK 509
A V++ G L +FA + + + + +F E+A +N +V D T I+
Sbjct: 119 F--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 510 NLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTM 668
+++ P+S+DSST VL NA++FKG+W F T PFH+ ++ P M
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFM 229
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +3
Query: 441 GKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQD 620
GK E A+ +N+WVE T+ IK ++ P S+D +T+ VL NA+YFKG+W +KFD T+D
Sbjct: 208 GKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 267
Query: 621 RPFHVNKD*TIQVPTM 668
FH+ ++Q P M
Sbjct: 268 GEFHLLDGKSVQAPFM 283
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +3
Query: 453 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFH 632
E +N+WV+ T+ IKN+ P S++ +T+ VL NA+YFKG+W +KFD T+D FH
Sbjct: 464 EVLGQVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFH 523
Query: 633 VNKD*TIQVPTMYKR 677
+ ++Q P M R
Sbjct: 524 LLDGESVQAPFMSTR 538
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 72.5 bits (170), Expect = 3e-13
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Frame = +3
Query: 153 DKSVILSAFSVMIPLAQLAIASTGESHDELLK-----AIDFPNDNVTKAVFTDLNQKVRS 317
+K+++ S S+ LA +A + G + DELL ++D ++V +AV L + S
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 318 IKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHT 494
G + A V+ EL + + + + + NF + + + IN WV T
Sbjct: 90 -GGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKAT 148
Query: 495 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTMYK 674
NK I ++ S+ T VLVNAIYFKG W + F + T FH ++ VP M
Sbjct: 149 NKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSS 208
Query: 675 RGD 683
R D
Sbjct: 209 RED 211
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 69.7 bits (163), Expect = 2e-12
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Frame = +3
Query: 165 ILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLA 344
+ S + LA LA + GE+ +LL + + + A L ++R+ L A
Sbjct: 23 MFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP--QLSFA 80
Query: 345 NKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRIKNLVD 521
+++ L +F + + ++++F AA +N ++ TN R+ N +
Sbjct: 81 AGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTIS 140
Query: 522 PSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVP 662
P + SST+CVL NA++FK +W KF+ TQ R FH + VP
Sbjct: 141 PGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVP 187
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 67.3 bits (157), Expect = 1e-11
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Frame = +3
Query: 147 NPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKG 326
N +++V+ S S+ LA +A + G + DEL+ + A DL + VR +
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLG-------AASLDDLEESVR--RA 78
Query: 327 VDLKLANKVYIANGNELNDQFAVV--SRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTN 497
V++ LA++ + G ++ V R + +F + +++ IN WV TN
Sbjct: 79 VEVGLADESE-SGGPRVSYACGVWHDERLALKPAYRAADFQRQPKSSRKKINKWVSKATN 137
Query: 498 KRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTMYKR 677
K I+ ++ S+ T VLVNAIYFKG W + F +E T FH ++ P M R
Sbjct: 138 KLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSR 197
Query: 678 GD 683
D
Sbjct: 198 ED 199
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 324 GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNK 500
G L A V+ L+ +F ++ +V+ S + +F K E+A + IN+WV+D T
Sbjct: 97 GPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKG 156
Query: 501 RIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVP 662
+ L+ ++D +T VL +A+YF+G W D+ D T ++ F+ +++VP
Sbjct: 157 TVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVP 210
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +3
Query: 453 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFH 632
E A+ +N+WV+ T+ IK ++ P S+D +T+ VL NA+YFKG+W +KFD T+D F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 633 VNKD*TIQVPTM 668
+ ++ P M
Sbjct: 64 LLDGKSVLAPFM 75
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/72 (43%), Positives = 37/72 (51%)
Frame = +3
Query: 468 INTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD* 647
IN WV TNK I ++ S+ T VLVNAIYFKG W D F +E T FH
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGS 149
Query: 648 TIQVPTMYKRGD 683
++ V M R D
Sbjct: 150 SVNVRFMRSRED 161
>11_01_0771 + 6453130-6454488
Length = 452
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +3
Query: 444 KNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDR 623
K EEA IN W T K I +++ P S+ T VL NAIYFKG W F++ T+ +
Sbjct: 169 KAEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERK 228
Query: 624 PFH 632
PF+
Sbjct: 229 PFY 231
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/74 (39%), Positives = 38/74 (51%)
Frame = +3
Query: 453 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFH 632
EA IN WV T I ++ P S T+ V+ NAIYFKG W FDK T +R F
Sbjct: 57 EARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFR 116
Query: 633 VNKD*TIQVPTMYK 674
+++VP M +
Sbjct: 117 RLDGSSVEVPFMQR 130
>05_06_0044 - 25150322-25151260
Length = 312
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +3
Query: 351 VYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSS 530
V++ LN FA + VF + V++ G A IN W T +K+++ S
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSA--GNPAAARAEINEWFSSQTGGFVKDILSNSI 60
Query: 531 LDS-----------STQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTM 668
D S L N++YF W F LT++ FHV+ D ++VP M
Sbjct: 61 DDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 225 ESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI--KGVDLKLANKVYIANGNELNDQFAVV 398
+ HD LLK+ NDN+TK + NQ + + KG D K +KV N+Q +
Sbjct: 467 KEHDTLLKSSVELNDNLTKTA-EERNQILECLKEKGGDNKALHKVIARLQRISNEQEKTI 525
Query: 399 S--RDVFNSEVQNLNFGKNEEAANI 467
+ R FN+E++N + G +E + +
Sbjct: 526 TGLRQGFNAELENKSLGTSESISRM 550
>06_03_0551 -
22027441-22028224,22029015-22029344,22029510-22029778,
22030530-22031453,22037761-22038360,22040049-22040267
Length = 1041
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/65 (20%), Positives = 34/65 (52%)
Frame = +3
Query: 432 LNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKEL 611
L G++ E + N ++D ++ ++V + + + LV+ +Y++ + +FD++
Sbjct: 100 LIIGRDSEVDKLFNL-IKDRSHTNTPHVVSVWGIPGTGRTALVSNVYYRCYYDTQFDRQT 158
Query: 612 TQDRP 626
T + P
Sbjct: 159 TVNMP 163
>04_03_0260 - 13580396-13582990
Length = 864
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 387 FAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLD 536
F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 737 FGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNNQLIDMIDKHSSD 785
>04_03_0256 -
13564070-13564456,13564543-13565299,13565734-13566535,
13566884-13566917
Length = 659
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 384 QFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLD 536
+F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 531 KFGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNSQLIDMIDKHSND 580
>01_07_0197 +
41912207-41912652,41913226-41913800,41913828-41915748,
41915836-41916049,41916143-41916394,41916469-41916528,
41916646-41916776,41916898-41917012,41917084-41917239
Length = 1289
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 435 NFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSST 545
N K + + + TWV+ ++ + L+D ++LDSST
Sbjct: 490 NKRKRDATSELSETWVQCDACRKWRRLLDGTALDSST 526
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 472 LIMLAASSF--LPKFKFCTSELNTSLDTTAN*SFNSLPLAMYTLLA 341
L++L SF LP C S L SL+ T+N S SLP M L A
Sbjct: 1121 LVILGCPSFSSLPASIRCLSNLK-SLELTSNNSLTSLPEGMQNLTA 1165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,959,285
Number of Sequences: 37544
Number of extensions: 325421
Number of successful extensions: 786
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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