Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_N02
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 103 1e-22
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 74 1e-13
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 71 1e-12
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 36 0.041
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_19092| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 28 8.3
SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 28 8.3
SB_33971| Best HMM Match : AhpC-TSA (HMM E-Value=2e-06) 28 8.3
SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09) 28 8.3
SB_22024| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.2) 28 8.3
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 103 bits (247), Expect = 1e-22
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 3/197 (1%)
Frame = +3
Query: 111 FTARMFNEVVKKNPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVF 290
F + + ++ ++ S S+++ LA + + G + ++ K FP D K F
Sbjct: 13 FALDLHRVLTAQDGQTNLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEK--F 70
Query: 291 TDLNQKVRSIK--GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAA- 461
D Q + + G + +AN+++ G E+ ++F S++ F++E+ +++ KN A
Sbjct: 71 HDFLQALNASNSDGNQILMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGAR 130
Query: 462 NIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNK 641
+ +N WVE T +IKNL+ + T LVNA+YFKGSW F++ TQ F
Sbjct: 131 DTVNRWVEQKTKDKIKNLIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTP 190
Query: 642 D*TIQVPTMYKRGDFAY 692
IQV MY+ +F Y
Sbjct: 191 SQEIQVQFMYQSSEFRY 207
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 330 DLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRI 506
++ +AN +++ + +F + + +++++ +++ + E A +N WVE+ T K+I
Sbjct: 49 EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108
Query: 507 KNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTMYKRGDF 686
+L+ P + T+ LVNAIYFKG W F KE + F ++V M+++ F
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKF 168
Query: 687 AY 692
Y
Sbjct: 169 KY 170
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +3
Query: 330 DLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNKRI 506
+++L NK++ + E+ ++F +R+ ++SE+ ++F K +A +N WV T I
Sbjct: 54 EIQLVNKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNI 113
Query: 507 KNLVDPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQDRPFHV 635
K L+ ++S T+ ++VNA+YFKG WK +F +E T F V
Sbjct: 114 KELIPHGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFV 156
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 66 SDIDPQRVLKNGNDQFTARMFNEVVKKNPDKSVILSAFSVMIPLAQLAIASTGES 230
SD++ +R + Q AR E++K PD+S L A ++ L LA+AST ++
Sbjct: 126 SDLEYERTVSTAEGQELARQLREIIKLVPDRSPSLQAQEALLGLG-LALASTQQN 179
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 33.1 bits (72), Expect = 0.22
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Frame = +3
Query: 303 QKVRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWV 482
Q+ I+ + + YIA +L ++ + + ++V ++ G +EAA W
Sbjct: 808 QQCTEIEEAMMNEVQRFYIAWNKKL-EELKRRNGQMSPTDVNSMWIGATDEAAEGHFVWE 866
Query: 483 EDHTNKRIKNLV--DPSSLDSSTQCVLVNAIYFKGSWKDKFDKELTQ---DRPF 629
D T N +P+ CV + A YF G W D F ++ ++PF
Sbjct: 867 GDGTVVNYTNWFRGEPNDHSGKEDCVEMMAGYFAGYWNDNFCEQFRNFICEKPF 920
>SB_19092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 253 IALRSSSCDS-PVEAIASWANGIMTENADNI 164
+ LR ++CD P++A+A W NG AD +
Sbjct: 159 VVLRKNACDDVPLDALADWCNGKWPPRADGL 189
>SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 647 LIFVNMEWTVLCQFLIKFVFPTSLK--VNCIYENTLC 543
+I M++ +L VFPT K V CIYEN C
Sbjct: 400 IITQKMKYVYTQSWLFTLVFPTQQKRVVQCIYENESC 436
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +1
Query: 514 WWIL---VRWTVAHSVFS*MQFTLREVGKTN 597
WW++ VRW + H + LR+VGK N
Sbjct: 224 WWLIPESVRWLLTHERSKEAEMILRKVGKFN 254
>SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 503
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 90 LKNGNDQFTARMFNEVVKKNPDKSVIL-SAFSVMIPLAQLAIASTGESHDELLKAIDFPN 266
L+ GN + +N+ +K NPD IL +V + + A E + LKA FPN
Sbjct: 51 LEQGNYKQALACYNQALKHNPDDPTILWERAAVCYQMGDVKKAL--EYYQVALKA--FPN 106
Query: 267 DNVTK 281
D++ K
Sbjct: 107 DDLEK 111
>SB_33971| Best HMM Match : AhpC-TSA (HMM E-Value=2e-06)
Length = 160
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 189 IPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKV 311
+ L+ L A+TG + DE+L+ ID TK V T ++ K+
Sbjct: 78 LKLSILYPATTGRNFDEILRVIDSLQLTATKKVATPVDWKL 118
>SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09)
Length = 227
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 360 ANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDH 491
A G ++ QF+V+ R +F S +++ EE + W++ H
Sbjct: 116 ATGAPVSRQFSVLLRQLFESYNSSVSTTNPEEFCRTVLAWLDQH 159
>SB_22024| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.2)
Length = 953
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 298 KSVNTALVTLSLGKSIALRSSSCDSPVEAIASWANGIMTENADNI 164
K +ALVT + K++ +S P A AS +N T+N D +
Sbjct: 633 KKPQSALVTSTKTKAVEPQSLMASKPSSASASPSNTYRTQNTDQV 677
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,350,436
Number of Sequences: 59808
Number of extensions: 396710
Number of successful extensions: 1117
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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