Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M24
(670 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 352 1e-97
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 48 7e-06
SB_31292| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0.0015) 39 0.003
SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_13788| Best HMM Match : rve (HMM E-Value=0.00016) 32 0.49
SB_49646| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_19307| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.068) 31 1.1
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 2.6
SB_59169| Best HMM Match : Sre (HMM E-Value=3.3) 29 2.6
SB_25386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_30566| Best HMM Match : zf-C4_Topoisom (HMM E-Value=0.38) 29 4.5
SB_11954| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16) 29 4.5
SB_21811| Best HMM Match : DNA_pol_B_2 (HMM E-Value=3.7e-06) 29 4.5
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 28 6.0
SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_25301| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.066) 28 6.0
SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013) 28 6.0
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 28 7.9
SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11) 28 7.9
SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10) 28 7.9
SB_35682| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_34860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_29742| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 28 7.9
SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20) 28 7.9
SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29) 28 7.9
SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_45671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_36722| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_26322| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025) 28 7.9
>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
Length = 322
Score = 352 bits (866), Expect = 1e-97
Identities = 160/207 (77%), Positives = 185/207 (89%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 181
QDVYKIGGIGTVPVGRVETG+LKPGTVV F+P+NITTEVKSVEMHHE+L EA+PGDNVGF
Sbjct: 110 QDVYKIGGIGTVPVGRVETGVLKPGTVVTFSPSNITTEVKSVEMHHESLAEALPGDNVGF 169
Query: 182 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 361
NVKNVSVK+++RG VAGD KNNPP+ FTAQVIV+NHPG+I GY+PVLDCHTAHIAC
Sbjct: 170 NVKNVSVKDIKRGNVAGDFKNNPPKPCKSFTAQVIVMNHPGEIHAGYSPVLDCHTAHIAC 229
Query: 362 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 541
KF ++ EK+DRR+GK EDNPK IK+GDAA+V ++PSKP+CVE+F EFPPLGRFAVRDM+
Sbjct: 230 KFDKLLEKIDRRSGKKLEDNPKMIKTGDAAMVEMIPSKPMCVETFTEFPPLGRFAVRDMK 289
Query: 542 QTVAVGVIKAVNFKEAGGGKVTKAAEK 622
QTVAVGVIK+V+ EA GGK TKAA K
Sbjct: 290 QTVAVGVIKSVDKTEAAGGKTTKAATK 316
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 386 VDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 535
+D++TGK + P+ IK AI L +C+E F +F +GRF +RD
Sbjct: 496 IDKKTGKKGQTRPRFIKQDQIAIARLETQGVICIEKFSDFQQMGRFTLRD 545
>SB_31292| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0.0015)
Length = 80
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 449 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 565
A V L S+P+CVE ++++ LGRF +R T+A GVI
Sbjct: 40 AEVELQTSRPVCVELYKDYKDLGRFMLRYGGNTIAAGVI 78
>SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 34.7 bits (76), Expect = 0.069
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Frame = +2
Query: 32 TVPVGRVETGILKPGTVVVFAPANI----TTEVKSVEMHHEALQEAVPGDNVGFNVKNVS 199
T+ V GIL G +V P T + S++ + + G + + +
Sbjct: 329 TLASADVRRGILHEGDTLVVGPLCSGHFQTVRILSLKRNRAPCRVVRAGQSASAALSGIE 388
Query: 200 VKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 322
ELRRG V D P R F A V +L HP IS +
Sbjct: 389 RHELRRGMVMTDPSLEP-RACMCFWADVYLLFHPAAISKRF 428
>SB_13788| Best HMM Match : rve (HMM E-Value=0.00016)
Length = 508
Score = 31.9 bits (69), Expect = 0.49
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +3
Query: 147 YKKLYPVTMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC*ITQVKYQTDTH 326
++ L+ VT+ VST T LS T++ R TH Q+S+ S C +Q + Q D
Sbjct: 19 FQDLFSVTLEVSTL-TALSAYYEGATVERRRAHTH----QSSENLSCCRRSQEECQVDER 73
Query: 327 LYWIATQPT*PANLPKSKRK 386
L W + P + +K+K
Sbjct: 74 LIWSSRCTKKPPSKEAAKKK 93
>SB_49646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 323 TPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVE 490
TPVL TAH+ K ++ + D P ++KS ++VN V S L E
Sbjct: 223 TPVLRIKTAHVTDKDNRVRSVLIIDNISQAPDTPATLKSSSDSVVNSVGSVGLVAE 278
>SB_19307| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.068)
Length = 173
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 11 YKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGD 169
+ I G GT+ G + +G + V +T +VKS++M + + +A GD
Sbjct: 120 FSIRGQGTIMTGTILSGSVCVNDTVEIPSLKVTKKVKSMQMFKKPVDKASQGD 172
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 351 T*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPP 452
T PA P + RK+T Q RTT P PP
Sbjct: 1459 TVPATKPPTTRKTTTATTTQGRTTRKPTTTAEPP 1492
>SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 903
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++VP++P CV SF EF + +RD+ Q
Sbjct: 380 MSVVPAQPQCVASFPEFCAVSVSYIRDLSQ 409
>SB_59169| Best HMM Match : Sre (HMM E-Value=3.3)
Length = 447
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = -2
Query: 204 LTDTFLTLKPTLSPGTASCRASWCISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPI 25
+T +T+ + + T+ +TD+TS+ M+ TT + + ++T T I
Sbjct: 124 ITSITMTITTSTTDITSKTMIITTSTTDITSITMIITTSTTDITSITMIITTSTTDITSI 183
Query: 24 PPILYTS 4
I+ TS
Sbjct: 184 TMIITTS 190
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 129 STDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPILYTS 4
+TD+TS+ M+ TT + + ++T T + I I+ T+
Sbjct: 234 TTDITSITMIITTSTTDITSITMIITTTTTDDISITMIIITT 275
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 129 STDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPILYTS 4
+TD+TS+ M+ TT + I +T T I I+ TS
Sbjct: 8 TTDITSITMIITTSTTDITSITIITTTSTTDITSITMIITTS 49
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 129 STDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPILYTS 4
+TD+TS+ M+ TT + + ++T T I I+ TS
Sbjct: 163 TTDITSITMIITTSTTDITSITMIITTSTTDITSITMIITTS 204
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 129 STDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPILYTS 4
+TD+TS+ M+ TT + + ++T T I I+ TS
Sbjct: 177 TTDITSITMIITTSTTDITSITMIITTSTTDITSITMIITTS 218
>SB_25386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 350 HIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKP 478
HIA K E+K D ++ K+ + PK++ SGD ++VP++P
Sbjct: 74 HIAKKL-EVK---DSQSSKNNDLYPKTVPSGDIGTDSVVPNQP 112
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +3
Query: 396 VLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 512
+ + +Q + P PP ++PP+P + P++ S+P
Sbjct: 163 LFILRQHPSYPPTQPFYPPTQPFYPPTPSSYPPTQPSYP 201
>SB_30566| Best HMM Match : zf-C4_Topoisom (HMM E-Value=0.38)
Length = 597
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -3
Query: 533 HARRNDRGVGIPGRTPHTGAWR--EPG*QWR 447
+A+ GV + GR P G WR PG +WR
Sbjct: 19 YAKAVPSGVKLVGRNPRYGEWRHKRPGYEWR 49
>SB_11954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 83 VVFAPANITTEVKSVEMHHE-ALQEAVPGDNVGFNVKNVSVKELRRGYVAGD----SKNN 247
VVF P NI+ + ++ A ++ +P + +KN + R GYV S+ N
Sbjct: 14 VVFDPENISVDEGMIKFKGRLAFRQYMPAKPTKYGIKNWMAADARNGYVCNFKVHLSQEN 73
Query: 248 PPR 256
P R
Sbjct: 74 PQR 76
>SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)
Length = 3999
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 460 VDNGGITRFNGFRVVLC*FTSTTVDFLFDFGKFAG 356
VDN G+ N F V++C T+D++FD + +G
Sbjct: 1700 VDNAGMYAENAFTVLVC--DRNTIDYIFDEVQLSG 1732
>SB_21811| Best HMM Match : DNA_pol_B_2 (HMM E-Value=3.7e-06)
Length = 925
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = -1
Query: 289 HNDLRCEVCSSPGWVVFRISC------NVTTAQFLDRYVFD 185
H ++C VC GW + R+ C + TT Q ++FD
Sbjct: 172 HRRVKCSVCKKVGWSMDRLVCETCGLRSFTTVQAFSDWLFD 212
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 561 TPTATVCLMSRTAKRPRGGNSWKDSTHRGLEG 466
TP+ VCL+SR + PR W R + G
Sbjct: 282 TPSLYVCLLSRAHRDPRLSTGWSPYEKREVRG 313
>SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 404 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP--LGRFAVRDMRQ 544
KST+DN S S A V SK + V S +E PP + R V ++Q
Sbjct: 57 KSTKDNGNSKGSSSRASERGVGSKQVSVSSLKEAPPRVVKRHTVSSLQQ 105
>SB_25301| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.066)
Length = 177
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 5 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANI----TTEVKSVEMHHEALQEAVPGDN 172
D Y + G+GTV G GI++ ++ P + ++S+ ++E G
Sbjct: 111 DTYSVPGVGTVISGTCMKGIIRLNDTLLLGPDPLGQFQPVAIRSIHRKRMPVKEVRGGQT 170
Query: 173 VGFNVK 190
F++K
Sbjct: 171 ASFSLK 176
>SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013)
Length = 872
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 295 SPRSNIKRIHTCIGLPHSPHSLQICR 372
SP+ KR T GLP S HSL CR
Sbjct: 537 SPKMKKKRPKTGEGLPGSKHSLDSCR 562
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
++++P++P CV SF EF + +RD+ Q
Sbjct: 381 MSVMPAQPQCVASFPEFCAVSVSYIRDLLQ 410
>SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11)
Length = 1175
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 385 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 414
>SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10)
Length = 549
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 389 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 418
>SB_35682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 147 YKKLYPVTMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQ 266
YKK+YP T + TS + LSR E R + PGE Q
Sbjct: 132 YKKIYPSTNTLYTSLSPLSRK---PLTNECRDYSKPGEYQ 168
>SB_34860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 ANITTEVKSVEMHHEALQ-EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 253
A+ TT A+Q E PG ++G + + VKEL++ AG + PP
Sbjct: 49 ASATTSTTGSHQAMSAMQSEEEPGASMGHRTERLKVKELKQMKRAGLTPLRPP 101
>SB_29742| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05)
Length = 1131
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 1044 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 1073
>SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 532 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 561
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = -2
Query: 201 TDTFLTLKPTLSPGTASCRASWCISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPI 25
T +T T +P T + + ISTD T+V+ ++ A+TTT +ST T PI
Sbjct: 1006 TSASMTKHATAAPITTNGTTAEPISTDGTTVLSMSTARTTTA-----SMSTAGTTAAPI 1059
>SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20)
Length = 1285
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 1111 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 1140
>SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29)
Length = 605
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 184 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 213
>SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 3 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32
>SB_45671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 87 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 116
>SB_36722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 3 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = -2
Query: 219 PRRNSLTDTFLTLKPTLSPGTASCRASWCISTDLTSVVMLAGAKTTTVPGFRIPVSTLPT 40
P DT L L+ TL+P T + S + A +TT PG + + +
Sbjct: 3479 PETTDEPDTTLALETTLAPETTMATETTVASETTVTPGSTAAPETTVAPGTTVALESTVA 3538
Query: 39 GTVPIPP 19
I P
Sbjct: 3539 PETSIAP 3545
>SB_26322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 544
+++ P++P CV SF EF + +RD+ Q
Sbjct: 3 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32
>SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025)
Length = 1616
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 360 QAMWAVWQSNTGVYPFDI*PG*FSTMTCAVKSA-APLGGLFFESPA 226
Q +AVW + G + + PG +ST + V+S+ A GG E+ A
Sbjct: 78 QLNFAVWCATAGCFTSTLPPGGYSTSSAPVRSSIAGAGGPAMEAQA 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,817,402
Number of Sequences: 59808
Number of extensions: 574828
Number of successful extensions: 2097
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2082
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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