Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M24
(670 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 399 e-113
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 390 e-111
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 235 2e-64
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 162 2e-42
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 26 0.28
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.5
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 3.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 6.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 8.0
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 399 bits (983), Expect = e-113
Identities = 189/212 (89%), Positives = 201/212 (94%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 181
QDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGF 310
Query: 182 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 361
NVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC
Sbjct: 311 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 370
Query: 362 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 541
KFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMR
Sbjct: 371 KFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMR 430
Query: 542 QTVAVGVIKAVNFKEAGGGKVTKAAEKAPRQE 637
QTVAVGVIKAV FK+A GKVTKAAEKA +++
Sbjct: 431 QTVAVGVIKAVTFKDA-AGKVTKAAEKAQKKK 461
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 390 bits (960), Expect = e-111
Identities = 185/212 (87%), Positives = 199/212 (93%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 181
QDVYKIGGIGTVPVGRVETGILKPG +V FAPA +TTEVKSVEMHHEAL EA+PGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVGF 310
Query: 182 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 361
NVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC
Sbjct: 311 NVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 370
Query: 362 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 541
KFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMR
Sbjct: 371 KFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMR 430
Query: 542 QTVAVGVIKAVNFKEAGGGKVTKAAEKAPRQE 637
QTVAVGVIK+V FK+ GKVTKAAEKA +++
Sbjct: 431 QTVAVGVIKSVTFKDT-QGKVTKAAEKAQKKK 461
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 171 LSPGTASCRASWCISTDLTSVVMLAGAKTTTVPG 70
L PG A ++T++ SV M A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 235 bits (576), Expect = 2e-64
Identities = 109/119 (91%), Positives = 114/119 (95%)
Frame = +2
Query: 119 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 298
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 299 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 475
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 162 bits (394), Expect = 2e-42
Identities = 76/81 (93%), Positives = 78/81 (96%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 181
QDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDNVGF
Sbjct: 194 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGF 253
Query: 182 NVKNVSVKELRRGYVAGDSKN 244
NVKNVSVKELRRGYVAGDSKN
Sbjct: 254 NVKNVSVKELRRGYVAGDSKN 274
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 26.2 bits (55), Expect = 0.28
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 550 RRRCNKGCELQGSRWWQSHQSC 615
R RC+ ++ GS+ WQ +SC
Sbjct: 54 RGRCSSYLQVSGSKIWQMERSC 75
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 241 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 351
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 574 HSLYYTDGDRLPHVTHGETTEGWEFLEG-LHTQGLGGNQVDNG 449
H LYY D ++ + + E +E + L+TQ G NG
Sbjct: 276 HGLYYVDTEQFSNPQYEENNVQYEGSQDILNTQSFGKVVSKNG 318
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/39 (20%), Positives = 20/39 (51%)
Frame = -2
Query: 132 ISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPI 16
+ T++T+ + ++ G +P+++LP + I I
Sbjct: 831 VVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSI 869
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 197 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 304
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 499 LEGLHTQGLGGNQVDNGGITRFNGFRVV 416
L LHT L N++ G FNG V+
Sbjct: 382 LYNLHTLELSDNKLRTVGAQLFNGLFVL 409
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 384 KSTVVLVNQQRTTLNPLNLVM 446
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 168 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 290
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,108
Number of Sequences: 438
Number of extensions: 4874
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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