Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M24
(670 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 328 2e-90
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 328 2e-90
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 328 2e-90
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 328 2e-90
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-... 146 2e-35
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 100 1e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 78 6e-15
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 66 2e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 59 3e-09
At4g27900.2 68417.m04005 expressed protein 32 0.40
At4g27900.1 68417.m04004 expressed protein 32 0.40
At1g45160.1 68414.m05177 protein kinase family protein contains ... 31 0.92
At1g28280.1 68414.m03471 VQ motif-containing protein contains PF... 29 2.1
At5g63950.1 68418.m08030 SNF2 domain-containing protein / helica... 28 4.9
At2g21450.1 68415.m02552 SNF2 domain-containing protein / helica... 28 4.9
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1... 28 4.9
At5g13580.1 68418.m01570 ABC transporter family protein 28 6.5
At5g11940.1 68418.m01396 subtilase family protein contains simil... 28 6.5
At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD) i... 27 8.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 328 bits (807), Expect = 2e-90
Identities = 149/207 (71%), Positives = 180/207 (86%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 181
QDVYKIGGIGTVPVGRVETG++KPG VV FAP +TTEVKSVEMHHE+L EA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGF 298
Query: 182 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 361
NVKNV+VK+L+RGYVA +SK++P +GAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 362 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 541
KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMR
Sbjct: 359 KFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMR 418
Query: 542 QTVAVGVIKAVNFKEAGGGKVTKAAEK 622
QTVAVGVIK+V+ K+ G KVTKAA K
Sbjct: 419 QTVAVGVIKSVDKKDPTGAKVTKAAVK 445
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 328 bits (807), Expect = 2e-90
Identities = 149/207 (71%), Positives = 180/207 (86%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 181
QDVYKIGGIGTVPVGRVETG++KPG VV FAP +TTEVKSVEMHHE+L EA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGF 298
Query: 182 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 361
NVKNV+VK+L+RGYVA +SK++P +GAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 362 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 541
KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMR
Sbjct: 359 KFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMR 418
Query: 542 QTVAVGVIKAVNFKEAGGGKVTKAAEK 622
QTVAVGVIK+V+ K+ G KVTKAA K
Sbjct: 419 QTVAVGVIKSVDKKDPTGAKVTKAAVK 445
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 328 bits (807), Expect = 2e-90
Identities = 149/207 (71%), Positives = 180/207 (86%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 181
QDVYKIGGIGTVPVGRVETG++KPG VV FAP +TTEVKSVEMHHE+L EA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGF 298
Query: 182 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 361
NVKNV+VK+L+RGYVA +SK++P +GAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 362 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 541
KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMR
Sbjct: 359 KFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMR 418
Query: 542 QTVAVGVIKAVNFKEAGGGKVTKAAEK 622
QTVAVGVIK+V+ K+ G KVTKAA K
Sbjct: 419 QTVAVGVIKSVDKKDPTGAKVTKAAVK 445
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 328 bits (807), Expect = 2e-90
Identities = 149/207 (71%), Positives = 180/207 (86%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 181
QDVYKIGGIGTVPVGRVETG++KPG VV FAP +TTEVKSVEMHHE+L EA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGF 298
Query: 182 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 361
NVKNV+VK+L+RGYVA +SK++P +GAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 362 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMR 541
KF+EI K+DRR+GK E PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMR
Sbjct: 359 KFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMR 418
Query: 542 QTVAVGVIKAVNFKEAGGGKVTKAAEK 622
QTVAVGVIK+V+ K+ G KVTKAA K
Sbjct: 419 QTVAVGVIKSVDKKDPTGAKVTKAAVK 445
>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
domain-containing protein similar to SP|P13905
Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
thaliana}; contains Pfam profile PF03143: Elongation
factor Tu C-terminal domain
Length = 104
Score = 146 bits (353), Expect = 2e-35
Identities = 64/104 (61%), Positives = 81/104 (77%)
Frame = +2
Query: 290 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 469
+NH GQI NGYTPVLDCHT+HIA KF+EI K+D RTG E PK +K+ +AAI+N+ P
Sbjct: 1 MNHLGQIKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTP 60
Query: 470 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 601
+KP+ VE++ +PPLGRFA+RDMRQTV VGVIK+V K+ G K
Sbjct: 61 TKPMVVEAYSAYPPLGRFAIRDMRQTVGVGVIKSVVKKDPSGAK 104
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 100 bits (239), Expect = 1e-21
Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Frame = +2
Query: 14 KIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 193
K +GTV +G+VE+G ++ G +V P +V ++ + ++ A PG+N+ +
Sbjct: 338 KFKDMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITG 397
Query: 194 VSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKF 367
+ +++ G+V S NP +F AQ+ +L + GY +L H C+
Sbjct: 398 IEDEDILSGFVLS-SIVNPVPAVTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEI 456
Query: 368 AEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQT 547
E+K ++D +T K + +K+G A + + + +C+E F +FP LGRF +R +T
Sbjct: 457 IELKSQIDLKTRKPMKKKVLFVKNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRTEGKT 516
Query: 548 VAVGVI 565
+AVG +
Sbjct: 517 IAVGKV 522
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 77.8 bits (183), Expect = 6e-15
Identities = 47/177 (26%), Positives = 86/177 (48%)
Frame = +2
Query: 44 GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGY 223
G++E G ++PG+ V+ P+ ++S+E +A A GDNV ++ + ++ G
Sbjct: 488 GKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQACTIARAGDNVALALQGIDANQVMAGD 547
Query: 224 VAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 403
V + P A V+VL I G H A A ++ +D +TG
Sbjct: 548 VLCHP-DFPVSVATHLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPKTG 606
Query: 404 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 574
+ T+ +P+ + + +A++ + P+CVE+F E LGR +R +TVA+G + +
Sbjct: 607 QPTKKSPRCLTAKQSAMLEVSLQNPVCVETFSESRALGRVFLRSSGRTVAMGKVTRI 663
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 66.5 bits (155), Expect = 2e-11
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 2/193 (1%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTE--VKSVEMHHEALQEAVPGDNV 175
+DV+ I G GTV GRVE G +K G V T V VEM + L EA+ GDNV
Sbjct: 293 EDVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNV 352
Query: 176 GFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 355
G ++ + +++RG V + P F A + VL + ++P +
Sbjct: 353 GLLLRGIQKADIQRGMVLAKPGSITPH--TKFEAIIYVLKK--EEGGRHSPFFAGYRPQF 408
Query: 356 ACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 535
+ ++ KV + E++ K + GD + + P+ E RFA+R+
Sbjct: 409 YMRTTDVTGKVTKIMNDKDEES-KMVMPGDRVKIVVELIVPVACEQGM------RFAIRE 461
Query: 536 MRQTVAVGVIKAV 574
+TV GVI +
Sbjct: 462 GGKTVGAGVIGTI 474
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 58.8 bits (136), Expect = 3e-09
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 7/198 (3%)
Frame = +2
Query: 2 QDVYKIGGIGTVPVGRVETGILKPGTVVVF-----APANITTEVKSVEMHHEALQEAVPG 166
+DV+ I G GTV GR+E G++K G V + + V VEM + L G
Sbjct: 273 EDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAG 332
Query: 167 DNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 346
DNVG ++ + ++++RG V +K + F A++ VL +T +
Sbjct: 333 DNVGLLLRGLKREDIQRGMVI--AKPGSCKTYKKFEAEIYVLTK--DEGGRHTAFFSNYR 388
Query: 347 AHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGD--AAIVNLVPSKPLCVESFQEFPPLGR 520
+ A+I KV+ +N K + GD A+ L+ PL E+ Q R
Sbjct: 389 PQFYLRTADITGKVE------LPENVKMVMPGDNVTAVFELIMPVPL--ETGQ------R 434
Query: 521 FAVRDMRQTVAVGVIKAV 574
FA+R+ +TV GV+ V
Sbjct: 435 FALREGGRTVGAGVVSKV 452
>At4g27900.2 68417.m04005 expressed protein
Length = 261
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 422 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 514
PKS+ SG+ + +++V K ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174
>At4g27900.1 68417.m04004 expressed protein
Length = 261
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 422 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 514
PKS+ SG+ + +++V K ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174
>At1g45160.1 68414.m05177 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 1067
Score = 30.7 bits (66), Expect = 0.92
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 320 YTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESF- 496
Y P CH AC E++ R S +D K IK + N SK + ++SF
Sbjct: 82 YKPKYSCHPPKYACSSTTSSEEIKLRGKNSGKDEEKMIKISE---TNPPCSKSMGIKSFS 138
Query: 497 QEFPPLG 517
E P G
Sbjct: 139 HELGPRG 145
>At1g28280.1 68414.m03471 VQ motif-containing protein contains
PF05678: VQ motif
Length = 247
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 423 LNPLNLVMPPLSTWFPP-SPCVWSPSRNSHPSVVSPCVT 536
+NPLN V P+++ F P P + SPS PS+V VT
Sbjct: 140 INPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSPVT 178
>At5g63950.1 68418.m08030 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|Q03468
Excision repair protein ERCC-6 (Cockayne syndrome
protein CSB) {Homo sapiens}; contains PFam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1090
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 571 SLYYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 443
+L YT ++ + + EG +L LHTQG GG D+ G+
Sbjct: 364 NLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGL 406
>At2g21450.1 68415.m02552 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|Q61687
Transcriptional regulator ATRX {Mus musculus}; contains
PFam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain
Length = 816
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 368 QICRLCGLCGNPIQVCIRLIF 306
++CR+CGL PI+ I ++F
Sbjct: 197 EVCRVCGLIKKPIESMIEVVF 217
>At1g27900.1 68414.m03419 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 700
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 189 LTLKPTLSPGTASCRASWCISTDLTSVVMLAGAKTTTVP 73
L L+P+LS + C+S LT V ML+ A+TT +P
Sbjct: 426 LPLEPSLSRTLIEANETGCLSQALTVVAMLS-AETTLLP 463
>At5g13580.1 68418.m01570 ABC transporter family protein
Length = 727
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 132 ISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVP 28
IS ++ +++GA TTT PVST+PT P
Sbjct: 384 ISASISKGKLVSGATTTTHSSGSSPVSTIPTFANP 418
>At5g11940.1 68418.m01396 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 762
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -1
Query: 565 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNG 449
Y + + LPH TH +T G F+ + G G + G
Sbjct: 217 YMSARESLPHGTHVASTAGGSFVSNVSDNGFGVGTIRGG 255
>At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD)
identical to Homeobox protein LUMINIDEPENDENS
(Swiss-Prot:Q38796) [Arabidopsis thaliana]
Length = 953
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 404 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVN 577
K+++ +P GD+ IV P KPL + S ++ PP+ + T + ++ VN
Sbjct: 447 KNSKKDPLPSAIGDSKIV--APEKPLALHSAKDSPPIQNNEAK-TEDTPVLSTVQPVN 501
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,232,915
Number of Sequences: 28952
Number of extensions: 381256
Number of successful extensions: 1298
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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