Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M23
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK096821-1|BAC04869.1| 405|Homo sapiens protein ( Homo sapiens ... 30 3.8
AC023270-2|AAX88845.1| 405|Homo sapiens unknown protein. 30 3.8
AY014404-1|AAG38891.1| 1770|Homo sapiens kinesin-like protein RB... 30 5.0
AY014403-1|AAG38890.1| 1805|Homo sapiens kinesin-like protein RB... 30 5.0
BC127116-1|AAI27117.1| 1757|Homo sapiens KIF13A protein protein. 29 6.6
BC127115-1|AAI27116.1| 1770|Homo sapiens KIF13A protein protein. 29 6.6
AL138724-4|CAI40949.1| 888|Homo sapiens protein ( leoporin 153k... 29 6.6
AL138724-3|CAI40948.1| 1768|Homo sapiens protein ( leoporin 153k... 29 6.6
AL138724-2|CAI40947.1| 1803|Homo sapiens protein ( Human DNA seq... 29 6.6
AL023807-2|CAI21671.1| 1768|Homo sapiens protein ( sin-like prot... 29 6.6
AL023807-1|CAI21670.1| 1803|Homo sapiens protein ( Human DNA seq... 29 6.6
AK025303-1|BAB15107.1| 659|Homo sapiens protein ( Homo sapiens ... 29 6.6
AJ291579-1|CAC20443.1| 1749|Homo sapiens KINESIN-13A2 protein. 29 6.6
AJ291578-1|CAC20442.1| 1757|Homo sapiens KINESIN-13A1 protein. 29 6.6
BC011992-1|AAH11992.1| 860|Homo sapiens KIAA1468 protein protein. 29 8.8
>AK096821-1|BAC04869.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ39502 fis, clone PROST2017098. ).
Length = 405
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -2
Query: 335 HSHFAVFTVCSTSAKDFISTAANRASEFLSDSCLIEINGTLVLP-SQVQWTSLTLVTVNQ 159
HS F + VC A +++ A N +S LS + ++ + G LP ++V W +L +V V+
Sbjct: 339 HSVF-IPKVCKADAGLYVARAQN-SSGALSSNVILHVTGNCRLPITRVNWITLCVVYVSV 396
Query: 158 S 156
S
Sbjct: 397 S 397
>AC023270-2|AAX88845.1| 405|Homo sapiens unknown protein.
Length = 405
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -2
Query: 335 HSHFAVFTVCSTSAKDFISTAANRASEFLSDSCLIEINGTLVLP-SQVQWTSLTLVTVNQ 159
HS F + VC A +++ A N +S LS + ++ + G LP ++V W +L +V V+
Sbjct: 339 HSVF-IPKVCKADAGLYVARAQN-SSGALSSNVILHVTGNCRLPITRVNWITLCVVYVSV 396
Query: 158 S 156
S
Sbjct: 397 S 397
>AY014404-1|AAG38891.1| 1770|Homo sapiens kinesin-like protein RBKIN2
protein.
Length = 1770
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVAFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>AY014403-1|AAG38890.1| 1805|Homo sapiens kinesin-like protein RBKIN1
protein.
Length = 1805
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVAFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>BC127116-1|AAI27117.1| 1757|Homo sapiens KIF13A protein protein.
Length = 1757
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>BC127115-1|AAI27116.1| 1770|Homo sapiens KIF13A protein protein.
Length = 1770
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>AL138724-4|CAI40949.1| 888|Homo sapiens protein ( leoporin 153kD,
the 3' end of a).).
Length = 888
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 307 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 348
>AL138724-3|CAI40948.1| 1768|Homo sapiens protein ( leoporin 153kD,
the 3' end of a).).
Length = 1768
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>AL138724-2|CAI40947.1| 1803|Homo sapiens protein ( Human DNA sequence
from clone RP11-500C11 on chromosome 6 Contains the 5'
end of the NUP153 gene for nucleoporin 153kD, the 3' end
of a).
Length = 1803
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>AL023807-2|CAI21671.1| 1768|Homo sapiens protein ( sin-like protein
(RBKIN) ).).
Length = 1768
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>AL023807-1|CAI21670.1| 1803|Homo sapiens protein ( Human DNA sequence
from clone RP3-525L6 on chromosome 6p22.3-23 Contains
the 5' end of a gene for a kinesin-like protein (RBKIN)
).
Length = 1803
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>AK025303-1|BAB15107.1| 659|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21650 fis, clone COL08516. ).
Length = 659
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 292 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 333
>AJ291579-1|CAC20443.1| 1749|Homo sapiens KINESIN-13A2 protein.
Length = 1749
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>AJ291578-1|CAC20442.1| 1757|Homo sapiens KINESIN-13A1 protein.
Length = 1757
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 341 SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 219
SP S A +TV + KD++ EF+SD L IE+ G
Sbjct: 914 SPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955
>BC011992-1|AAH11992.1| 860|Homo sapiens KIAA1468 protein protein.
Length = 860
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 52 ISALLVVAHADIDKFLGRAVSIGISPNITELGTGCDWFTVTKVSE-VHCTCDGRTNVPLI 228
+ LL ++HA +D V +G +P EL W+ V S V CT + +
Sbjct: 578 VMTLLSLSHAPLDSLKASFVELGANPAYHELLLTVLWYGVVHTSALVRCTA---ARMFEL 634
Query: 229 SIKQESDKNSDARFAAVEIKSFAEVEQTVKTA 324
+++ S+ D R A + ++ E +V+ A
Sbjct: 635 TLRGMSEALVDKRVAPALVTLSSDPEFSVRIA 666
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,856,454
Number of Sequences: 237096
Number of extensions: 1267442
Number of successful extensions: 3131
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3131
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -