Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M22
(281 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 27 0.51
SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces po... 26 1.2
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 25 2.1
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 25 2.7
SPAC6B12.03c |||HbrB family protein|Schizosaccharomyces pombe|ch... 24 3.6
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 24 4.7
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 24 4.7
SPBC1A4.10c |pmc1|SPBP23A10.01c, med14|mediator complex subunit ... 24 4.7
SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase |Schizosacchar... 23 6.3
SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces pombe... 23 6.3
SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces pombe... 23 6.3
SPCC736.03c |||phenylalanyl-tRNA synthetase|Schizosaccharomyces ... 23 6.3
SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces pombe... 23 6.3
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 23 6.3
SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces pombe... 23 6.3
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 23 8.3
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 23 8.3
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 23 8.3
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 23 8.3
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 23 8.3
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 27.1 bits (57), Expect = 0.51
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 161 LDLVAPYQATPENIEKAKIIISSRFFVHLIRLIN 262
LD + P+ A PEN + I S F H I L N
Sbjct: 723 LDYIVPFAAIPENGREIDGIDSRSEFAHRIMLTN 756
>SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 25.8 bits (54), Expect = 1.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 56 SIIDLESIITVHELSEADKEKTRYKYFYYNEIQPKLDLVAPYQATPENIE 205
SI DL+S+ + E S D+ K + Y+Y + K + + + P+N +
Sbjct: 65 SIDDLQSLFMIIENSNIDELKQQCFYYYLLKDWEKSETYSEQVSLPKNYQ 114
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 25.0 bits (52), Expect = 2.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 47 DYFSIIDLESIITVHELSEADK 112
+Y S+ D+ +I+ + ELSEADK
Sbjct: 426 EYKSLQDIIAILGMDELSEADK 447
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 24.6 bits (51), Expect = 2.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 274 HVNFVYQSDQVNEETTTDDNFSLLNILRCGLIRCN*IQLWLNF 146
+ +F+ QS + N+ DDN SL +I+ G I N +W F
Sbjct: 85 YTSFLNQSPKKND---FDDNMSLNSIVTMGSILSNVSSVWSIF 124
>SPAC6B12.03c |||HbrB family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 302
Score = 24.2 bits (50), Expect = 3.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 163 QLWLNFVVIKVFIPCFFL 110
+++L IKV PCFFL
Sbjct: 8 KIYLGLTTIKVQCPCFFL 25
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 23.8 bits (49), Expect = 4.7
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 2 LKEAMYTILNELNPGDYFSIIDLESIITVHELSEADKEKTRYKYFYYNEIQPKLDLV 172
L +++ I N LN D + +D + H + DKEK+++ YY K++++
Sbjct: 50 LLRSIHIIQNLLNELDNY--VDRSDCL-FHSVWRTDKEKSKFSGNYYPFSPSKMNVI 103
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 23.8 bits (49), Expect = 4.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 143 NEIQPKLDLVAPYQATPENIEKAKIIISSRFFVHLIRLINKVD 271
N + P+ + +PEN EKAK +I + ++I D
Sbjct: 1076 NVLDPEETVTITIVGSPENCEKAKEMIQEKVASQYTQMITVPD 1118
>SPBC1A4.10c |pmc1|SPBP23A10.01c, med14|mediator complex subunit
Pmc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 879
Score = 23.8 bits (49), Expect = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 280 LAHVNFVYQSDQVNEETTTDDN 215
L HV+F Y D+ T DDN
Sbjct: 698 LKHVDFTYLDDEKFRATIHDDN 719
>SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 173 APYQATPENIEKAKIIISSRFFVHLI 250
A Y+A E + A+++I+ R H++
Sbjct: 318 ARYEAGAEFLASARVVITDRLHAHIL 343
>SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 23.4 bits (48), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 166 IQLWLNFVVIKVFIPCFFLIGFGQF 92
I+ + N V+++ I FLI FG F
Sbjct: 264 IEFYSNCVLVQSLILSLFLISFGYF 288
>SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 23.4 bits (48), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 166 IQLWLNFVVIKVFIPCFFLIGFGQF 92
I+ + N V+++ I FLI FG F
Sbjct: 264 IEFYSNCVLVQSLILSLFLISFGYF 288
>SPCC736.03c |||phenylalanyl-tRNA synthetase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 429
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 5 KEAMYTILNELNPGDYFSII 64
K+ + I N+ NP D++ II
Sbjct: 346 KDIAFWINNDFNPNDFYEII 365
>SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 23.4 bits (48), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 166 IQLWLNFVVIKVFIPCFFLIGFGQF 92
I+ + N V+++ I FLI FG F
Sbjct: 264 IEFYSNCVLVQSLILSLFLISFGYF 288
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 23.4 bits (48), Expect = 6.3
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 26 LNE--LNPGDYFSIIDLESIITVHE 94
LNE L+PG YF + E +I V E
Sbjct: 182 LNECPLDPGGYFIVKGTEKVILVQE 206
>SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 23.4 bits (48), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 166 IQLWLNFVVIKVFIPCFFLIGFGQF 92
I+ + N V+++ I FLI FG F
Sbjct: 264 IEFYSNCVLVQSLILSLFLISFGYF 288
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 23.0 bits (47), Expect = 8.3
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 41 PGDYFSIIDLESIITVHELSEADKEKTRYKYFYYNEIQPKLDLVAPY 181
P D S+IT+++++ +++++R E Q + DL+ PY
Sbjct: 341 PSDMEPTFSENSLITINKMAIEERKQSRRLEQPLAESQHQEDLLNPY 387
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 23.0 bits (47), Expect = 8.3
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +2
Query: 41 PGDYFSIIDLESIITVHELSEADKEKTRYKYFYYNEIQPKLDLVAPYQATPENIEKAKI 217
P I+D ++ LS DK+ ++ ++NE+ + P+ + +KAKI
Sbjct: 1478 PDSIKPILDRVMDKMINSLSGEDKQFYEREFTFFNEVTSISGKLKPFIRKSKPEKKAKI 1536
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 23.0 bits (47), Expect = 8.3
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +2
Query: 8 EAMYTILNELNPGDYFSIIDLESII 82
E ++T +++LNPG S+ +L +++
Sbjct: 167 ERVFTNIDDLNPGKLISLQNLYNLL 191
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 23.0 bits (47), Expect = 8.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 114 SLSASDSSWTVIIDSKSMMLK*SPGFSSFNIVYIAS 7
S + SD SWT + SK G +S +Y+ S
Sbjct: 80 SCNNSDQSWTSRVTSKKNEAGTESGDASVRRIYVTS 115
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 23.0 bits (47), Expect = 8.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 89 HELSEADKEKTRYKYFYYNEIQPKLDLVAPYQATPE 196
HEL E+ YF ++I +D+V P T E
Sbjct: 1823 HELWYEGLEEASQAYFSDHDISLMIDIVKPLHETLE 1858
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,037,656
Number of Sequences: 5004
Number of extensions: 18573
Number of successful extensions: 66
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 63619130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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