Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M22
         (281 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16257| Best HMM Match : rve (HMM E-Value=1.1e-13)                   31   0.19 
SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   0.76 
SB_3013| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=2)                29   0.76 
SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.3  
SB_58334| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.1  
SB_50923| Best HMM Match : Sec6 (HMM E-Value=0.0068)                   27   3.1  
SB_58603| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.1  
SB_8975| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   4.1  
SB_40739| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-28)                 26   5.4  
SB_41393| Best HMM Match : WSC (HMM E-Value=0.06)                      25   7.1  
SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23)              25   7.1  
SB_42906| Best HMM Match : FAA_hydrolase (HMM E-Value=8.8e-40)         25   7.1  
SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19)                  25   7.1  
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.4  
SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)                 25   9.4  
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)                25   9.4  
SB_6396| Best HMM Match : No HMM Matches (HMM E-Value=.)               25   9.4  
SB_3197| Best HMM Match : No HMM Matches (HMM E-Value=.)               25   9.4  

>SB_16257| Best HMM Match : rve (HMM E-Value=1.1e-13)
          Length = 353

 Score = 30.7 bits (66), Expect = 0.19
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 95  LSEADKEKTRYKYFYYNEIQPKLDLVAPYQATPENIEKAKIIISSRFFV 241
           L++ +   T Y   +YN+ +PK  L +      +N EK ++  S RFFV
Sbjct: 76  LAKQNFTDTNYALKHYNQTRPKQSLESMLLRPQQNAEKHRVGNSLRFFV 124


>SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1150

 Score = 28.7 bits (61), Expect = 0.76
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = +2

Query: 26   LNELNPGDYFSIIDLESIITVHELSEADKEKTRYK----YFYYNEIQPKL-DLVAPYQAT 190
            L+ L    YFS IDL S     E+  AD+ KT +      F YN +   L +  A +Q  
Sbjct: 1069 LDALGGARYFSTIDLASAYNQVEVHPADRHKTAFTSPMGLFEYNRMPFCLCNAPATFQRL 1128

Query: 191  PENIEKAKII 220
              NI ++ I+
Sbjct: 1129 MTNIFRSDIL 1138


>SB_3013| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=2)
          Length = 213

 Score = 28.7 bits (61), Expect = 0.76
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 229 TTDDNFSLLNILRCGLIRCN*IQLWLNFVVIKVFIP 122
           T  + F LLN L   +I+CN   +W   +VI +F P
Sbjct: 69  TCVNEFQLLNRLLASMIQCN--GIWCCLIVIIIFFP 102


>SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 191 VWLDTVQLNPTLVEFRCNKSIYTLFFPYRLR 99
           VW+ T QL      FR N +   +F+P RLR
Sbjct: 821 VWVITQQLTSITKPFRENIAALVVFYPARLR 851


>SB_58334| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 511

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  ELSEADKEKTRYKYFYYNEIQPKLD 166
           E+ E D    RYKY+ + ++ PK+D
Sbjct: 1   EVQEFDTIYLRYKYYTFFDLNPKVD 25


>SB_50923| Best HMM Match : Sec6 (HMM E-Value=0.0068)
          Length = 312

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +2

Query: 86  VHELSEADKEKTRYKYFYYNEIQPKLDLVAPYQATPENIEKAKIIIS 226
           V +L+E D E+ +   + ++++    +L+      PEN+EKA I+IS
Sbjct: 82  VSKLAE-DLEQVKQVQYRHSQLSKCNELLNHIFNVPENVEKAYILIS 127


>SB_58603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 438

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +2

Query: 26  LNELNPGDYFSIIDLESIITVHELSEADKE 115
           +NE   G+YF I+ ++ + + H +S+ + E
Sbjct: 338 INEERKGEYFEIMSVDYMSSEHTVSDGENE 367


>SB_8975| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1002

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 23  ILNELNPGDYFSIIDLESIITVHELSEADKEKTRYK 130
           +L+ L+   YFS  DL+S     E+   DKE T +K
Sbjct: 390 LLDCLSNSRYFSTYDLKSGCWQIEMDPKDKENTAFK 425


>SB_40739| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-28)
          Length = 327

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 166 IQLWLNFVVIKVFIPCFFLI 107
           I LWL ++VI  F+PC F++
Sbjct: 181 IHLWL-YMVIFTFLPCVFML 199


>SB_41393| Best HMM Match : WSC (HMM E-Value=0.06)
          Length = 361

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 268 NFVYQSDQVNEETTTDDN 215
           NFVY  ++ N ET TDD+
Sbjct: 298 NFVYHLEEGNGETQTDDD 315


>SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23)
          Length = 390

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 5   KEAMYTILNELNPGDYFSIIDLESIITVHE 94
           K   Y I    NPG+ F II+   +ITV++
Sbjct: 263 KPVSYFIDQVTNPGEAFVIINTTGVITVNK 292


>SB_42906| Best HMM Match : FAA_hydrolase (HMM E-Value=8.8e-40)
          Length = 223

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 44  GDYFSIIDLESIITVHELSEADKEKTRYKYFYYNEIQ 154
           GD+   I+LE  I   E  E    K+ +KY Y++  Q
Sbjct: 96  GDHAFDINLEVSIKPEESDETIVSKSNFKYMYWSMSQ 132


>SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19)
          Length = 544

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 15/88 (17%), Positives = 39/88 (44%)
 Frame = +2

Query: 8   EAMYTILNELNPGDYFSIIDLESIITVHELSEADKEKTRYKYFYYNEIQPKLDLVAPYQA 187
           E++ + L  + PG + +++DL+     + +S A++ +   ++ +  ++   + L     +
Sbjct: 306 ESLQSALTLVKPGSFMAVLDLKD--AYYSVSIAEEHRCYLRFVFMEQLYEYVSLPNGLAS 363

Query: 188 TPENIEKAKIIISSRFFVHLIRLINKVD 271
            P    K    + S      I L+  +D
Sbjct: 364 APRMFTKLMKPVYSSLRAKDICLVGYID 391


>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1888

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 23   ILNELNPGDYFSIIDLES 76
            +L++LN   YFSI+D+ S
Sbjct: 1133 VLSKLNGAQYFSIVDVRS 1150


>SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)
          Length = 916

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 5   KEAMYTILNELNPGDYFSIIDLESIITVHELSEAD 109
           KEA  T+L+ LNP D  + +  ES +   +++  D
Sbjct: 181 KEAAKTVLDTLNPRDRVAFLAFESGVRRVKVTSGD 215


>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
          Length = 333

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 129 LYLV-FSL-SASDSSWTVIIDSKSMMLK*SPGFSSFNIVYI 13
           LYL+ F + S    SW  +ID +S  L  S G S+FNI ++
Sbjct: 163 LYLIHFPVPSGVVGSWQAMIDLRSRGLIRSIGVSNFNIQHL 203


>SB_6396| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 382

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 108 IRKKQGINTFITTKFNQSWI*LHRIKPH 191
           + K+QGI       F ++WI L R  PH
Sbjct: 231 LAKRQGIRDVTAKHFWKTWIPLTRKSPH 258


>SB_3197| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 652

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 166 IQLWLNFVVIKVFIPCFFLIGFGQFVDRNN*F*VNDAKVVAGVQFI*YSIHSFF 5
           + +WL+   + V  PC    GF  FVD +    +   K   G+  I Y+ +  F
Sbjct: 277 LAVWLDDSQLSVEKPCIVPAGFVAFVDSHEIRPILGRKACLGMNIIQYNDNDQF 330


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,216,156
Number of Sequences: 59808
Number of extensions: 117074
Number of successful extensions: 393
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 290602631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)