Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M22
(281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67884-2|CAA91808.1| 429|Caenorhabditis elegans Hypothetical pr... 27 2.7
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ... 27 2.7
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 26 4.8
AF125459-8|AAD12840.2| 317|Caenorhabditis elegans Serpentine re... 26 4.8
AC024817-45|AAF59574.3| 432|Caenorhabditis elegans Hypothetical... 25 6.3
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 25 8.4
U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell m... 25 8.4
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 25 8.4
AF099925-8|AAR12969.2| 119|Caenorhabditis elegans Hypothetical ... 25 8.4
AF099925-4|AAR12970.2| 273|Caenorhabditis elegans Hypothetical ... 25 8.4
AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein. 25 8.4
>Z67884-2|CAA91808.1| 429|Caenorhabditis elegans Hypothetical
protein T14G8.4 protein.
Length = 429
Score = 26.6 bits (56), Expect = 2.7
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -2
Query: 184 LIRCN*IQLWLNFVVIKVFIPCFF 113
+++ + LWL+F+++ V + CFF
Sbjct: 213 ILKSQILALWLDFLIVFVLLCCFF 236
>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
protein Y39A1B.2 protein.
Length = 1003
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 225 LMIILAFSIFSGVA*YGATKSNFG 154
++I++ F ++ GVA YG TK G
Sbjct: 509 IVILVTFCVYLGVASYGCTKVKLG 532
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 271 VNFVYQSDQVNEETTTDDNFSLLN 200
V F YQ VN +TT DD+ + L+
Sbjct: 1765 VGFSYQDKNVNNDTTWDDDKTALD 1788
>AF125459-8|AAD12840.2| 317|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 21 protein.
Length = 317
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 140 YNEIQPKLDLVAPYQATPENIEKAKIIIS 226
++++ P LVAPY TP I KA I+
Sbjct: 92 FSDVTPLCPLVAPYFFTPSIITKAYYTIN 120
>AC024817-45|AAF59574.3| 432|Caenorhabditis elegans Hypothetical
protein Y54G2A.4 protein.
Length = 432
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 244 VNEETTTDDNFSLLNILRCGLIRCN*IQLWLNFVVIKVFIPCFFLI 107
V+EET + + LN+ R L LW NF +I +F C F +
Sbjct: 358 VSEETRS----TTLNLFRVPLNLIVIFILWQNFTMISIFKFCVFFL 399
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 98 SEADKEKTRY--KYFYYNEIQPKLDLVAPYQATPENIEKAKIIISSRFFVHLIRLINKVD 271
SEAD ++ +Y K N + + ++ + IEK + ++ FF+++I L ++VD
Sbjct: 4591 SEADFQQGQYEPKIAESNSTKSRGSILNMLARNFKTIEKITLYLA--FFINVILLFHRVD 4648
Query: 272 VS 277
+S
Sbjct: 4649 IS 4650
>U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell
migration protein 23 protein.
Length = 552
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -3
Query: 129 LYLVFSLSASDSSWT----VIIDSKSMMLK*SPGFSSF 28
L++ +S SDS VI D+K +M K SPG S+F
Sbjct: 57 LFVYNWISTSDSELIQIEPVIYDNKPVMKKISPGLSTF 94
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 98 SEADKEKTRY--KYFYYNEIQPKLDLVAPYQATPENIEKAKIIISSRFFVHLIRLINKVD 271
SEAD ++ +Y K N + + ++ + IEK + ++ FF+++I L ++VD
Sbjct: 4583 SEADFQQGQYEPKIAESNSTKSRGSILNMLARNFKTIEKITLYLA--FFINVILLFHRVD 4640
Query: 272 VS 277
+S
Sbjct: 4641 IS 4642
>AF099925-8|AAR12969.2| 119|Caenorhabditis elegans Hypothetical
protein K01A2.3 protein.
Length = 119
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 145 VVIKVFIPCFFLIGFGQFV 89
+++ VF+ C L+ FG FV
Sbjct: 23 IILMVFVLCLLLLAFGGFV 41
>AF099925-4|AAR12970.2| 273|Caenorhabditis elegans Hypothetical
protein K01A2.4 protein.
Length = 273
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 145 VVIKVFIPCFFLIGFGQFV 89
+++ VF+ C L+ FG FV
Sbjct: 177 IILMVFVLCLLLLAFGGFV 195
>AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein.
Length = 552
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -3
Query: 129 LYLVFSLSASDSSWT----VIIDSKSMMLK*SPGFSSF 28
L++ +S SDS VI D+K +M K SPG S+F
Sbjct: 57 LFVYNWISTSDSELIQIEPVIYDNKPVMKKISPGLSTF 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,564,750
Number of Sequences: 27780
Number of extensions: 96954
Number of successful extensions: 318
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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